Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SOX11P35716 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.32■□□□□ 0.84
SOX11P35716 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.32■□□□□ 0.84
SOX11P35716 TERF1P2-201ENST00000583350 1212 ntBASIC20.32■□□□□ 0.84
SOX11P35716 AC105233.4-201ENST00000642045 216 ntBASIC20.32■□□□□ 0.84
SOX11P35716 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SOX11P35716 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SOX11P35716 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SOX11P35716 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.32■□□□□ 0.84
SOX11P35716 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SOX11P35716 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.31■□□□□ 0.84
SOX11P35716 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX11P35716 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SOX11P35716 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX11P35716 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
SOX11P35716 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SOX11P35716 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
SOX11P35716 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.31■□□□□ 0.84
SOX11P35716 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.31■□□□□ 0.84
SOX11P35716 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 LINC02228-203ENST00000641970 1355 ntBASIC20.31■□□□□ 0.84
SOX11P35716 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX11P35716 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SOX11P35716 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SOX11P35716 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SOX11P35716 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SOX11P35716 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX11P35716 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.29■□□□□ 0.84
SOX11P35716 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.29■□□□□ 0.84
SOX11P35716 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.29■□□□□ 0.84
SOX11P35716 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 AC022517.1-201ENST00000592429 346 ntBASIC20.29■□□□□ 0.84
SOX11P35716 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.29■□□□□ 0.84
SOX11P35716 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX11P35716 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SOX11P35716 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX11P35716 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX11P35716 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SOX11P35716 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 KRT18P14-201ENST00000534205 1250 ntBASIC20.28■□□□□ 0.84
SOX11P35716 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX11P35716 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.28■□□□□ 0.84
SOX11P35716 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
SOX11P35716 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX11P35716 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms