Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.08■□□□□ 0.97
RPA3P35244 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.08■□□□□ 0.97
RPA3P35244 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPA3P35244 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.08■□□□□ 0.97
RPA3P35244 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPA3P35244 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.08■□□□□ 0.96
RPA3P35244 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPA3P35244 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.08■□□□□ 0.96
RPA3P35244 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPA3P35244 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.08■□□□□ 0.96
RPA3P35244 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 IGHV3-19-201ENST00000521488 291 ntBASIC21.07■□□□□ 0.96
RPA3P35244 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RPA3P35244 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.07■□□□□ 0.96
RPA3P35244 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPA3P35244 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPA3P35244 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.06■□□□□ 0.96
RPA3P35244 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 AC007952.6-201ENST00000573168 2673 ntBASIC21.06■□□□□ 0.96
RPA3P35244 AC003957.1-201ENST00000625108 2673 ntBASIC21.06■□□□□ 0.96
RPA3P35244 AC006128.1-201ENST00000624704 1661 ntBASIC21.06■□□□□ 0.96
RPA3P35244 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.06■□□□□ 0.96
RPA3P35244 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.06■□□□□ 0.96
RPA3P35244 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.06■□□□□ 0.96
RPA3P35244 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.06■□□□□ 0.96
RPA3P35244 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.06■□□□□ 0.96
RPA3P35244 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RPA3P35244 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPA3P35244 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPA3P35244 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPA3P35244 TSPY26P-201ENST00000476365 1326 ntBASIC21.05■□□□□ 0.96
RPA3P35244 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.05■□□□□ 0.96
RPA3P35244 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPA3P35244 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 PLK5-205ENST00000642079 1969 ntBASIC21.05■□□□□ 0.96
RPA3P35244 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RPA3P35244 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.05■□□□□ 0.96
RPA3P35244 PCDHAC2-203ENST00000615316 3011 ntBASIC21.05■□□□□ 0.96
RPA3P35244 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.05■□□□□ 0.96
RPA3P35244 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPA3P35244 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPA3P35244 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
RPA3P35244 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.04■□□□□ 0.96
RPA3P35244 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
RPA3P35244 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.04■□□□□ 0.96
RPA3P35244 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.04■□□□□ 0.96
RPA3P35244 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RPA3P35244 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.04■□□□□ 0.96
RPA3P35244 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPA3P35244 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.04■□□□□ 0.96
RPA3P35244 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.03■□□□□ 0.96
RPA3P35244 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RPA3P35244 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RPA3P35244 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPA3P35244 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPA3P35244 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms