Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 RPS1AYLR441C 768 nt2.16□□□□□ -2.06
UFD4P33202 SEC65YML105C 822 nt2.16□□□□□ -2.06
UFD4P33202 ERG29YMR134W 714 nt2.16□□□□□ -2.06
UFD4P33202 YLR345WYLR345W 1530 nt2.16□□□□□ -2.06
UFD4P33202 VPS3YDR495C 3036 nt2.16□□□□□ -2.06
UFD4P33202 VPS54YDR027C 2670 nt2.16□□□□□ -2.06
UFD4P33202 RPS18AYDR450W 441 nt2.15□□□□□ -2.06
UFD4P33202 QCR9YGR183C 201 nt2.15□□□□□ -2.06
UFD4P33202 YIR014WYIR014W 729 nt2.15□□□□□ -2.06
UFD4P33202 CTK2YJL006C 972 nt2.15□□□□□ -2.06
UFD4P33202 YOR029WYOR029W 336 nt2.15□□□□□ -2.06
UFD4P33202 YPR089WYPR089W 2667 nt2.15□□□□□ -2.07
UFD4P33202 SYH1YPL105C 2550 nt2.15□□□□□ -2.07
UFD4P33202 YJL070CYJL070C 2667 nt2.15□□□□□ -2.07
UFD4P33202 UBR1YGR184C 5853 nt2.15□□□□□ -2.07
UFD4P33202 INA22YIR024C 651 nt2.14□□□□□ -2.07
UFD4P33202 YNL235CYNL235C 432 nt2.14□□□□□ -2.07
UFD4P33202 YOL166CYOL166C 339 nt2.14□□□□□ -2.07
UFD4P33202 RRP14YKL082C 1305 nt2.14□□□□□ -2.07
UFD4P33202 GRX3YDR098C 858 nt2.14□□□□□ -2.07
UFD4P33202 DCG1YIR030C 735 nt2.14□□□□□ -2.07
UFD4P33202 RRP42YDL111C 798 nt2.13□□□□□ -2.07
UFD4P33202 COS3YML132W 1140 nt2.13□□□□□ -2.07
UFD4P33202 COS2YBR302C 1140 nt2.13□□□□□ -2.07
UFD4P33202 SRD1YCR018C 666 nt2.12□□□□□ -2.07
UFD4P33202 COS6YGR295C 1146 nt2.12□□□□□ -2.07
UFD4P33202 TPO5YKL174C 1857 nt2.12□□□□□ -2.07
UFD4P33202 MDM32YOR147W 1869 nt2.12□□□□□ -2.07
UFD4P33202 REV1YOR346W 2958 nt2.11□□□□□ -2.07
UFD4P33202 REC102YLR329W 795 nt2.11□□□□□ -2.07
UFD4P33202 MSM1YGR171C 1728 nt2.11□□□□□ -2.07
UFD4P33202 IRE1YHR079C 3348 nt2.1□□□□□ -2.07
UFD4P33202 CTH1YDR151C 978 nt2.1□□□□□ -2.07
UFD4P33202 DDI2YFL061W 678 nt2.1□□□□□ -2.07
UFD4P33202 tQ(UUG)E2tQ(UUG)E2 72 nt2.1□□□□□ -2.07
UFD4P33202 YHR180W-AYHR180W-A 183 nt2.1□□□□□ -2.07
UFD4P33202 LIP2YLR239C 987 nt2.1□□□□□ -2.07
UFD4P33202 PKH3YDR466W 2697 nt2.1□□□□□ -2.07
UFD4P33202 HRI1YLR301W 735 nt2.09□□□□□ -2.07
UFD4P33202 IST1YNL265C 897 nt2.09□□□□□ -2.07
UFD4P33202 HOS4YIL112W 3252 nt2.09□□□□□ -2.07
UFD4P33202 YDR169C-AYDR169C-A 150 nt2.08□□□□□ -2.08
UFD4P33202 CRS5YOR031W 210 nt2.08□□□□□ -2.08
UFD4P33202 HPA2YPR193C 471 nt2.08□□□□□ -2.08
UFD4P33202 LHS1YKL073W 2646 nt2.08□□□□□ -2.08
UFD4P33202 SNL1YIL016W 480 nt2.07□□□□□ -2.08
UFD4P33202 SEN15YMR059W 387 nt2.07□□□□□ -2.08
UFD4P33202 ATP11YNL315C 957 nt2.07□□□□□ -2.08
UFD4P33202 GRX1YCL035C 333 nt2.07□□□□□ -2.08
UFD4P33202 EAF5YEL018W 840 nt2.07□□□□□ -2.08
UFD4P33202 YHI9YHR029C 885 nt2.07□□□□□ -2.08
UFD4P33202 SPO75YLL005C 2607 nt2.07□□□□□ -2.08
UFD4P33202 CWC22YGR278W 1734 nt2.06□□□□□ -2.08
UFD4P33202 UTP20YBL004W 7482 nt2.06□□□□□ -2.08
UFD4P33202 MYO2YOR326W 4725 nt2.06□□□□□ -2.08
UFD4P33202 RAD50YNL250W 3939 nt2.06□□□□□ -2.08
UFD4P33202 IRA2YOL081W 9240 nt2.06□□□□□ -2.08
UFD4P33202 RGA2YDR379W 3030 nt2.06□□□□□ -2.08
UFD4P33202 SHE2YKL130C 741 nt2.06□□□□□ -2.08
UFD4P33202 MTR2YKL186C 555 nt2.06□□□□□ -2.08
UFD4P33202 YBR196C-BYBR196C-B 105 nt2.06□□□□□ -2.08
UFD4P33202 PET100YDR079W 336 nt2.05□□□□□ -2.08
UFD4P33202 snR3snR3 194 nt2.05□□□□□ -2.08
UFD4P33202 FYV8YGR196C 2454 nt2.05□□□□□ -2.08
UFD4P33202 SMY2YBR172C 2223 nt2.05□□□□□ -2.08
UFD4P33202 FIN1YDR130C 876 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)BtF(GAA)B 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)FtF(GAA)F 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)GtF(GAA)G 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)H1tF(GAA)H1 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)H2tF(GAA)H2 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)MtF(GAA)M 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)P1tF(GAA)P1 73 nt2.04□□□□□ -2.08
UFD4P33202 tF(GAA)P2tF(GAA)P2 73 nt2.04□□□□□ -2.08
UFD4P33202 DOP1YDR141C 5097 nt2.04□□□□□ -2.08
UFD4P33202 UTP6YDR449C 1323 nt2.04□□□□□ -2.08
UFD4P33202 DUF1YOL087C 3351 nt2.04□□□□□ -2.08
UFD4P33202 YDR034C-DYDR034C-D 5313 nt2.04□□□□□ -2.08
UFD4P33202 YDR210W-BYDR210W-B 5313 nt2.04□□□□□ -2.08
UFD4P33202 YLR410W-BYLR410W-B 5313 nt2.04□□□□□ -2.08
UFD4P33202 UBC6YER100W 753 nt2.03□□□□□ -2.08
UFD4P33202 MIG2YGL209W 1149 nt2.03□□□□□ -2.08
UFD4P33202 RPS25AYGR027C 327 nt2.03□□□□□ -2.08
UFD4P33202 MRPL9YGR220C 810 nt2.03□□□□□ -2.08
UFD4P33202 SDP1YIL113W 630 nt2.03□□□□□ -2.08
UFD4P33202 PIS1YPR113W 663 nt2.03□□□□□ -2.08
UFD4P33202 SLM1YIL105C 2061 nt2.03□□□□□ -2.08
UFD4P33202 HOP1YIL072W 1818 nt2.02□□□□□ -2.09
UFD4P33202 ERP3YDL018C 678 nt2.02□□□□□ -2.09
UFD4P33202 VPS38YLR360W 1320 nt2.02□□□□□ -2.09
UFD4P33202 ALG1YBR110W 1350 nt2.02□□□□□ -2.09
UFD4P33202 UTP5YDR398W 1932 nt2.02□□□□□ -2.09
UFD4P33202 YLR154W-AYLR154W-A 186 nt2.01□□□□□ -2.09
UFD4P33202 NPR1YNL183C 2373 nt2.01□□□□□ -2.09
UFD4P33202 YBL073WYBL073W 312 nt2.01□□□□□ -2.09
UFD4P33202 YCK2YNL154C 1641 nt2□□□□□ -2.09
UFD4P33202 SPC98YNL126W 2541 nt2□□□□□ -2.09
UFD4P33202 PRM2YIL037C 1971 nt2□□□□□ -2.09
UFD4P33202 SNF11YDR073W 510 nt2□□□□□ -2.09
UFD4P33202 ERP1YAR002C-A 660 nt2□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms