Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCR1P32246 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCR1P32246 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.7■■□□□ 1.06
CCR1P32246 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.7■■□□□ 1.06
CCR1P32246 AC080038.1-201ENST00000611274 1154 ntBASIC21.7■■□□□ 1.06
CCR1P32246 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 AC010536.3-201ENST00000620306 533 ntBASIC21.7■■□□□ 1.06
CCR1P32246 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCR1P32246 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCR1P32246 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.69■■□□□ 1.06
CCR1P32246 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.69■■□□□ 1.06
CCR1P32246 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR1P32246 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR1P32246 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.69■■□□□ 1.06
CCR1P32246 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR1P32246 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.69■■□□□ 1.06
CCR1P32246 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCR1P32246 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCR1P32246 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.69■■□□□ 1.06
CCR1P32246 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCR1P32246 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCR1P32246 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
CCR1P32246 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCR1P32246 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCR1P32246 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
CCR1P32246 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.68■■□□□ 1.06
CCR1P32246 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.68■■□□□ 1.06
CCR1P32246 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.68■■□□□ 1.06
CCR1P32246 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.68■■□□□ 1.06
CCR1P32246 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCR1P32246 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCR1P32246 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCR1P32246 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.67■■□□□ 1.06
CCR1P32246 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.67■■□□□ 1.06
CCR1P32246 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCR1P32246 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CCR1P32246 AC245052.3-201ENST00000450182 901 ntBASIC21.67■■□□□ 1.06
CCR1P32246 TERF1P5-201ENST00000477545 1207 ntBASIC21.67■■□□□ 1.06
CCR1P32246 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.67■■□□□ 1.06
CCR1P32246 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCR1P32246 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCR1P32246 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 RBM17P2-201ENST00000616397 1405 ntBASIC21.66■■□□□ 1.06
CCR1P32246 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.66■■□□□ 1.06
CCR1P32246 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 DUX4L16-201ENST00000555130 1264 ntBASIC21.66■■□□□ 1.06
CCR1P32246 AC243732.1-201ENST00000612648 864 ntBASIC21.66■■□□□ 1.06
CCR1P32246 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.66■■□□□ 1.06
CCR1P32246 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.66■■□□□ 1.06
CCR1P32246 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCR1P32246 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.66■■□□□ 1.06
CCR1P32246 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CCR1P32246 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCR1P32246 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.65■■□□□ 1.06
CCR1P32246 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.65■■□□□ 1.06
CCR1P32246 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.65■■□□□ 1.06
CCR1P32246 AC073111.5-205ENST00000641717 521 ntBASIC21.65■■□□□ 1.06
CCR1P32246 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCR1P32246 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.06
CCR1P32246 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCR1P32246 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCR1P32246 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCR1P32246 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms