Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.59■■□□□ 1.05
TNFRSF8P28908 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFRSF8P28908 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TNFRSF8P28908 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
TNFRSF8P28908 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFRSF8P28908 AP006587.3-201ENST00000525742 1516 ntBASIC21.59■■□□□ 1.05
TNFRSF8P28908 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFRSF8P28908 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF8P28908 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF8P28908 AC006455.2-201ENST00000429931 906 ntBASIC21.58■■□□□ 1.05
TNFRSF8P28908 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFRSF8P28908 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 AC092666.2-201ENST00000613287 246 ntBASIC21.58■■□□□ 1.05
TNFRSF8P28908 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.58■■□□□ 1.05
TNFRSF8P28908 BX323043.1-201ENST00000641006 1765 ntBASIC21.58■■□□□ 1.04
TNFRSF8P28908 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TNFRSF8P28908 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNFRSF8P28908 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.57■■□□□ 1.04
TNFRSF8P28908 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
TNFRSF8P28908 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.57■■□□□ 1.04
TNFRSF8P28908 AL117332.1-201ENST00000622628 974 ntBASIC21.57■■□□□ 1.04
TNFRSF8P28908 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFRSF8P28908 AC112907.3-201ENST00000577781 2400 ntBASIC21.57■■□□□ 1.04
TNFRSF8P28908 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFRSF8P28908 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFRSF8P28908 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF8P28908 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF8P28908 AC239859.2-201ENST00000444165 318 ntBASIC21.56■■□□□ 1.04
TNFRSF8P28908 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF8P28908 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TNFRSF8P28908 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF8P28908 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF8P28908 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 AL020996.1-203ENST00000536896 2307 ntBASIC21.55■■□□□ 1.04
TNFRSF8P28908 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF8P28908 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF8P28908 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TNFRSF8P28908 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF8P28908 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TNFRSF8P28908 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF8P28908 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF8P28908 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 AL139246.5-201ENST00000606645 996 ntBASIC21.53■■□□□ 1.04
TNFRSF8P28908 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF8P28908 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF8P28908 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TNFRSF8P28908 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF8P28908 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF8P28908 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFRSF8P28908 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF8P28908 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.52■■□□□ 1.04
TNFRSF8P28908 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF8P28908 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF8P28908 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.52■■□□□ 1.04
TNFRSF8P28908 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF8P28908 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
TNFRSF8P28908 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFRSF8P28908 AC018445.3-201ENST00000624177 1945 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms