Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
VARSP26640 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARSP26640 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
VARSP26640 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARSP26640 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VARSP26640 ID1-201ENST00000376105 1233 ntBASIC20.47■□□□□ 0.87
VARSP26640 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARSP26640 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
VARSP26640 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.47■□□□□ 0.87
VARSP26640 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.47■□□□□ 0.87
VARSP26640 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VARSP26640 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
VARSP26640 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.47■□□□□ 0.87
VARSP26640 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
VARSP26640 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARSP26640 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.46■□□□□ 0.87
VARSP26640 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.46■□□□□ 0.87
VARSP26640 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
VARSP26640 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
VARSP26640 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
VARSP26640 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.46■□□□□ 0.87
VARSP26640 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
VARSP26640 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.46■□□□□ 0.87
VARSP26640 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.46■□□□□ 0.87
VARSP26640 DUX4L2-201ENST00000561772 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
VARSP26640 DUX4L6-201ENST00000626483 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4L1-201ENST00000627662 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4L8-201ENST00000629013 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4L3-201ENST00000630187 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4L7-201ENST00000630678 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 DUX4L5-201ENST00000630834 1275 ntBASIC20.46■□□□□ 0.87
VARSP26640 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARSP26640 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.45■□□□□ 0.86
VARSP26640 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARSP26640 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VARSP26640 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.45■□□□□ 0.86
VARSP26640 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.45■□□□□ 0.86
VARSP26640 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.45■□□□□ 0.86
VARSP26640 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.45■□□□□ 0.86
VARSP26640 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VARSP26640 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VARSP26640 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.45■□□□□ 0.86
VARSP26640 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VARSP26640 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.44■□□□□ 0.86
VARSP26640 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.44■□□□□ 0.86
VARSP26640 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.44■□□□□ 0.86
VARSP26640 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VARSP26640 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.44■□□□□ 0.86
VARSP26640 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARSP26640 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VARSP26640 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.43■□□□□ 0.86
VARSP26640 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VARSP26640 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.43■□□□□ 0.86
VARSP26640 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
VARSP26640 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.43■□□□□ 0.86
VARSP26640 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
VARSP26640 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARSP26640 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VARSP26640 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
VARSP26640 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
VARSP26640 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.42■□□□□ 0.86
VARSP26640 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.42■□□□□ 0.86
VARSP26640 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARSP26640 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.42■□□□□ 0.86
VARSP26640 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms