Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.32■■□□□ 1
PTPN3P26045 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN3P26045 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.31■■□□□ 1
PTPN3P26045 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 AC004854.2-201ENST00000608450 1441 ntBASIC21.31■■□□□ 1
PTPN3P26045 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.31■■□□□ 1
PTPN3P26045 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
PTPN3P26045 POU5F1P4-201ENST00000413175 1085 ntBASIC21.31■■□□□ 1
PTPN3P26045 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.31■■□□□ 1
PTPN3P26045 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.31■■□□□ 1
PTPN3P26045 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.31■■□□□ 1
PTPN3P26045 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.31■■□□□ 1
PTPN3P26045 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTPN3P26045 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.3■■□□□ 1
PTPN3P26045 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
PTPN3P26045 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN3P26045 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.3■■□□□ 1
PTPN3P26045 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTPN3P26045 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.3■■□□□ 1
PTPN3P26045 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.3■■□□□ 1
PTPN3P26045 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.3■■□□□ 1
PTPN3P26045 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.3■■□□□ 1
PTPN3P26045 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.3■■□□□ 1
PTPN3P26045 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN3P26045 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.3■■□□□ 1
PTPN3P26045 DUX4L2-201ENST00000561772 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.3■■□□□ 1
PTPN3P26045 DUX4L6-201ENST00000626483 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4L1-201ENST00000627662 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4L8-201ENST00000629013 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4L3-201ENST00000630187 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4L7-201ENST00000630678 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 DUX4L5-201ENST00000630834 1275 ntBASIC21.3■■□□□ 1
PTPN3P26045 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PTPN3P26045 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTPN3P26045 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.3■■□□□ 1
PTPN3P26045 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PTPN3P26045 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.29■■□□□ 1
PTPN3P26045 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.29■■□□□ 1
PTPN3P26045 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.29■■□□□ 1
PTPN3P26045 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.29■■□□□ 1
PTPN3P26045 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.29■■□□□ 1
PTPN3P26045 KRT18P61-201ENST00000585825 1298 ntBASIC21.29■■□□□ 1
PTPN3P26045 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.29■■□□□ 1
PTPN3P26045 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTPN3P26045 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.28■■□□□ 1
PTPN3P26045 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 AP001160.3-201ENST00000601484 763 ntBASIC21.28■■□□□ 1
PTPN3P26045 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN3P26045 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTPN3P26045 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.27■■□□□ 1
PTPN3P26045 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.27■■□□□ 1
PTPN3P26045 AC097381.1-201ENST00000429019 1296 ntBASIC21.27■■□□□ 1
PTPN3P26045 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.27■■□□□ 1
PTPN3P26045 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.27■■□□□ 1
PTPN3P26045 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN3P26045 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTPN3P26045 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PTPN3P26045 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PTPN3P26045 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN3P26045 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms