Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RTT105YER104W 627 nt3.56□□□□□ -1.84
MSH1P25846 LIF1YGL090W 1266 nt3.56□□□□□ -1.84
MSH1P25846 EMC4YGL231C 573 nt3.56□□□□□ -1.84
MSH1P25846 VEL1YGL258W 621 nt3.56□□□□□ -1.84
MSH1P25846 IST3YIR005W 447 nt3.56□□□□□ -1.84
MSH1P25846 RPL17BYJL177W 555 nt3.56□□□□□ -1.84
MSH1P25846 YNL089CYNL089C 477 nt3.56□□□□□ -1.84
MSH1P25846 YPR170CYPR170C 336 nt3.56□□□□□ -1.84
MSH1P25846 SET1YHR119W 3243 nt3.56□□□□□ -1.84
MSH1P25846 DOA4YDR069C 2781 nt3.56□□□□□ -1.84
MSH1P25846 YBR259WYBR259W 2067 nt3.55□□□□□ -1.84
MSH1P25846 YDL050CYDL050C 372 nt3.55□□□□□ -1.84
MSH1P25846 YDL163WYDL163W 303 nt3.55□□□□□ -1.84
MSH1P25846 EMI1YDR512C 564 nt3.55□□□□□ -1.84
MSH1P25846 VMA21YGR105W 234 nt3.55□□□□□ -1.84
MSH1P25846 YIL175WYIL175W 318 nt3.55□□□□□ -1.84
MSH1P25846 YJL222W-BYJL222W-B 138 nt3.55□□□□□ -1.84
MSH1P25846 YKR051WYKR051W 1257 nt3.55□□□□□ -1.84
MSH1P25846 MBA1YBR185C 837 nt3.55□□□□□ -1.84
MSH1P25846 GPI13YLL031C 3054 nt3.55□□□□□ -1.84
MSH1P25846 REG1YDR028C 3045 nt3.54□□□□□ -1.84
MSH1P25846 VHR1YIL056W 1923 nt3.54□□□□□ -1.84
MSH1P25846 MUS81YDR386W 1899 nt3.54□□□□□ -1.84
MSH1P25846 NSA1YGL111W 1392 nt3.54□□□□□ -1.84
MSH1P25846 SAE2YGL175C 1038 nt3.54□□□□□ -1.84
MSH1P25846 VAR1Q0140 1197 nt3.54□□□□□ -1.84
MSH1P25846 PCL5YHR071W 690 nt3.54□□□□□ -1.84
MSH1P25846 YJR087WYJR087W 351 nt3.54□□□□□ -1.84
MSH1P25846 PHD1YKL043W 1101 nt3.54□□□□□ -1.84
MSH1P25846 VPS63YLR261C 327 nt3.54□□□□□ -1.84
MSH1P25846 TAP42YMR028W 1101 nt3.54□□□□□ -1.84
MSH1P25846 YMR181CYMR181C 465 nt3.54□□□□□ -1.84
MSH1P25846 DYN3YMR299C 939 nt3.54□□□□□ -1.84
MSH1P25846 YOR277CYOR277C 309 nt3.54□□□□□ -1.84
MSH1P25846 MDN1YLR106C 14733 nt3.54□□□□□ -1.84
MSH1P25846 PFK26YIL107C 2484 nt3.54□□□□□ -1.84
MSH1P25846 FAR1YJL157C 2493 nt3.54□□□□□ -1.84
MSH1P25846 ASI3YNL008C 2031 nt3.54□□□□□ -1.84
MSH1P25846 SEA4YBL104C 3117 nt3.54□□□□□ -1.84
MSH1P25846 UBX3YDL091C 1368 nt3.53□□□□□ -1.84
MSH1P25846 MFB1YDR219C 1398 nt3.53□□□□□ -1.84
MSH1P25846 SEC15YGL233W 2733 nt3.53□□□□□ -1.84
MSH1P25846 RPB9YGL070C 369 nt3.53□□□□□ -1.84
MSH1P25846 YGL214WYGL214W 486 nt3.53□□□□□ -1.84
MSH1P25846 YGR109W-AYGR109W-A 873 nt3.53□□□□□ -1.84
MSH1P25846 MVB12YGR206W 306 nt3.53□□□□□ -1.84
MSH1P25846 YIL082WYIL082W 873 nt3.53□□□□□ -1.84
MSH1P25846 RPL16BYNL069C 597 nt3.53□□□□□ -1.84
MSH1P25846 CSM4YPL200W 471 nt3.53□□□□□ -1.84
MSH1P25846 STI1YOR027W 1770 nt3.53□□□□□ -1.84
MSH1P25846 NOP12YOL041C 1380 nt3.52□□□□□ -1.85
MSH1P25846 GYL1YMR192W 2163 nt3.52□□□□□ -1.85
MSH1P25846 YAK1YJL141C 2424 nt3.52□□□□□ -1.85
MSH1P25846 RAD2YGR258C 3096 nt3.52□□□□□ -1.85
MSH1P25846 YDR220CYDR220C 294 nt3.52□□□□□ -1.85
MSH1P25846 YKL023C-AYKL023C-A 228 nt3.52□□□□□ -1.85
MSH1P25846 YOR283WYOR283W 693 nt3.52□□□□□ -1.85
MSH1P25846 YPL142CYPL142C 318 nt3.52□□□□□ -1.85
MSH1P25846 YLR446WYLR446W 1302 nt3.51□□□□□ -1.85
MSH1P25846 DAD1YDR016C 285 nt3.51□□□□□ -1.85
MSH1P25846 FAR7YFR008W 666 nt3.51□□□□□ -1.85
MSH1P25846 CDC26YFR036W 375 nt3.51□□□□□ -1.85
MSH1P25846 PPX1YHR201C 1194 nt3.51□□□□□ -1.85
MSH1P25846 ASG7YJL170C 630 nt3.51□□□□□ -1.85
MSH1P25846 YKT6YKL196C 603 nt3.51□□□□□ -1.85
MSH1P25846 ARC18YLR370C 537 nt3.51□□□□□ -1.85
MSH1P25846 YNL235CYNL235C 432 nt3.51□□□□□ -1.85
MSH1P25846 PFY1YOR122C 381 nt3.51□□□□□ -1.85
MSH1P25846 NIP7YPL211W 546 nt3.51□□□□□ -1.85
MSH1P25846 CUR1YPR158W 759 nt3.51□□□□□ -1.85
MSH1P25846 RRP5YMR229C 5190 nt3.51□□□□□ -1.85
MSH1P25846 CHS2YBR038W 2892 nt3.51□□□□□ -1.85
MSH1P25846 UBP5YER144C 2418 nt3.51□□□□□ -1.85
MSH1P25846 SQS1YNL224C 2304 nt3.5□□□□□ -1.85
MSH1P25846 MAK5YBR142W 2322 nt3.5□□□□□ -1.85
MSH1P25846 YDR210W-AYDR210W-A 1317 nt3.5□□□□□ -1.85
MSH1P25846 CBP2YHL038C 1893 nt3.5□□□□□ -1.85
MSH1P25846 RPS14AYCR031C 414 nt3.5□□□□□ -1.85
MSH1P25846 PEX10YDR265W 1014 nt3.5□□□□□ -1.85
MSH1P25846 RPL11BYGR085C 525 nt3.5□□□□□ -1.85
MSH1P25846 EFG1YGR271C-A 702 nt3.5□□□□□ -1.85
MSH1P25846 BUD19YJL188C 309 nt3.5□□□□□ -1.85
MSH1P25846 YAL031W-AYAL031W-A 309 nt3.5□□□□□ -1.85
MSH1P25846 AIM25YJR100C 984 nt3.5□□□□□ -1.85
MSH1P25846 RPL11AYPR102C 525 nt3.5□□□□□ -1.85
MSH1P25846 SEC66YBR171W 621 nt3.5□□□□□ -1.85
MSH1P25846 CTF13YMR094W 1437 nt3.5□□□□□ -1.85
MSH1P25846 RIM13YMR154C 2184 nt3.49□□□□□ -1.85
MSH1P25846 PCI8YIL071C 1335 nt3.49□□□□□ -1.85
MSH1P25846 YCG1YDR325W 3108 nt3.49□□□□□ -1.85
MSH1P25846 CRD1YDL142C 852 nt3.49□□□□□ -1.85
MSH1P25846 RSM24YDR175C 960 nt3.49□□□□□ -1.85
MSH1P25846 STE14YDR410C 720 nt3.49□□□□□ -1.85
MSH1P25846 YGR293CYGR293C 462 nt3.49□□□□□ -1.85
MSH1P25846 SRP21YKL122C 504 nt3.49□□□□□ -1.85
MSH1P25846 YLR257WYLR257W 966 nt3.49□□□□□ -1.85
MSH1P25846 GMC2YLR445W 567 nt3.49□□□□□ -1.85
MSH1P25846 TVP18YMR071C 504 nt3.49□□□□□ -1.85
MSH1P25846 INP1YMR204C 1263 nt3.49□□□□□ -1.85
MSH1P25846 CSI2YOL007C 1026 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms