Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH3P22223 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH3P22223 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH3P22223 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH3P22223 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 UBE2DNL-204ENST00000602536 740 ntBASIC20.41■□□□□ 0.86
CDH3P22223 AC011767.1-201ENST00000617410 1153 ntBASIC20.41■□□□□ 0.86
CDH3P22223 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
CDH3P22223 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH3P22223 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH3P22223 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH3P22223 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDH3P22223 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH3P22223 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDH3P22223 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH3P22223 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH3P22223 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDH3P22223 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH3P22223 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH3P22223 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH3P22223 AC242852.2-201ENST00000615738 1807 ntBASIC20.39■□□□□ 0.86
CDH3P22223 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
CDH3P22223 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.39■□□□□ 0.86
CDH3P22223 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.39■□□□□ 0.86
CDH3P22223 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH3P22223 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
CDH3P22223 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH3P22223 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH3P22223 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.39■□□□□ 0.85
CDH3P22223 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH3P22223 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH3P22223 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.39■□□□□ 0.85
CDH3P22223 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH3P22223 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CDH3P22223 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH3P22223 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH3P22223 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH3P22223 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH3P22223 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH3P22223 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH3P22223 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH3P22223 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.38■□□□□ 0.85
CDH3P22223 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH3P22223 AC073111.5-205ENST00000641717 521 ntBASIC20.38■□□□□ 0.85
CDH3P22223 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH3P22223 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDH3P22223 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDH3P22223 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH3P22223 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH3P22223 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH3P22223 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH3P22223 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 AC003102.1-202ENST00000563394 1796 ntBASIC20.37■□□□□ 0.85
CDH3P22223 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.37■□□□□ 0.85
CDH3P22223 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 KRT18P20-201ENST00000548986 1279 ntBASIC20.37■□□□□ 0.85
CDH3P22223 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.37■□□□□ 0.85
CDH3P22223 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.37■□□□□ 0.85
CDH3P22223 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 MYCNOS-205ENST00000641950 531 ntBASIC20.37■□□□□ 0.85
CDH3P22223 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH3P22223 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH3P22223 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CDH3P22223 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDH3P22223 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH3P22223 FAM99A-202ENST00000538190 1989 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms