Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCK1P16333 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NCK1P16333 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NCK1P16333 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
NCK1P16333 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NCK1P16333 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NCK1P16333 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NCK1P16333 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
NCK1P16333 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NCK1P16333 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NCK1P16333 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.71■□□□□ 0.75
NCK1P16333 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NCK1P16333 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NCK1P16333 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NCK1P16333 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.71■□□□□ 0.75
NCK1P16333 AC112907.3-201ENST00000577781 2400 ntBASIC19.71■□□□□ 0.75
NCK1P16333 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NCK1P16333 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.7■□□□□ 0.74
NCK1P16333 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NCK1P16333 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
NCK1P16333 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCK1P16333 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NCK1P16333 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 AC121338.2-201ENST00000622535 1744 ntBASIC19.69■□□□□ 0.74
NCK1P16333 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.69■□□□□ 0.74
NCK1P16333 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.69■□□□□ 0.74
NCK1P16333 AL356740.2-201ENST00000601559 647 ntBASIC19.69■□□□□ 0.74
NCK1P16333 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.69■□□□□ 0.74
NCK1P16333 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.69■□□□□ 0.74
NCK1P16333 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.69■□□□□ 0.74
NCK1P16333 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCK1P16333 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NCK1P16333 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NCK1P16333 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
NCK1P16333 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCK1P16333 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.68■□□□□ 0.74
NCK1P16333 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.68■□□□□ 0.74
NCK1P16333 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCK1P16333 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCK1P16333 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCK1P16333 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.67■□□□□ 0.74
NCK1P16333 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 SRD5A1P1-201ENST00000442297 786 ntBASIC19.67■□□□□ 0.74
NCK1P16333 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.67■□□□□ 0.74
NCK1P16333 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NCK1P16333 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
NCK1P16333 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCK1P16333 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.66■□□□□ 0.74
NCK1P16333 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCK1P16333 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms