Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN1P07384 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPN1P07384 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.53■□□□□ 0.88
CAPN1P07384 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CAPN1P07384 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CAPN1P07384 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
CAPN1P07384 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.53■□□□□ 0.88
CAPN1P07384 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN1P07384 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN1P07384 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN1P07384 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN1P07384 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
CAPN1P07384 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.52■□□□□ 0.88
CAPN1P07384 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN1P07384 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CAPN1P07384 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
CAPN1P07384 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CAPN1P07384 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CAPN1P07384 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CAPN1P07384 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CAPN1P07384 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN1P07384 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN1P07384 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN1P07384 AP004607.4-201ENST00000530158 1459 ntBASIC20.5■□□□□ 0.87
CAPN1P07384 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CAPN1P07384 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.5■□□□□ 0.87
CAPN1P07384 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN1P07384 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.5■□□□□ 0.87
CAPN1P07384 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN1P07384 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CAPN1P07384 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN1P07384 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CAPN1P07384 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
CAPN1P07384 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN1P07384 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CAPN1P07384 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CAPN1P07384 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CAPN1P07384 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CAPN1P07384 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN1P07384 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN1P07384 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.49■□□□□ 0.87
CAPN1P07384 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN1P07384 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN1P07384 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.49■□□□□ 0.87
CAPN1P07384 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CAPN1P07384 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN1P07384 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CAPN1P07384 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN1P07384 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.48■□□□□ 0.87
CAPN1P07384 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN1P07384 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN1P07384 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN1P07384 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CAPN1P07384 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN1P07384 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
CAPN1P07384 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms