Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 KRT16P2-201ENST00000414673 1423 ntBASIC21.24■□□□□ 0.99
HLA-DQB2P05538 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
HLA-DQB2P05538 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQB2P05538 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 KRT18P20-201ENST00000548986 1279 ntBASIC21.22■□□□□ 0.99
HLA-DQB2P05538 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 AC120498.10-201ENST00000621827 505 ntBASIC21.22■□□□□ 0.99
HLA-DQB2P05538 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQB2P05538 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 UBE2DNL-204ENST00000602536 740 ntBASIC21.21■□□□□ 0.99
HLA-DQB2P05538 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQB2P05538 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DQB2P05538 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.19■□□□□ 0.98
HLA-DQB2P05538 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQB2P05538 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQB2P05538 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms