Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DRAP01903 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
HLA-DRAP01903 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DRAP01903 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
HLA-DRAP01903 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.53■■□□□ 1.2
HLA-DRAP01903 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DRAP01903 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DRAP01903 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HLA-DRAP01903 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DRAP01903 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.52■■□□□ 1.2
HLA-DRAP01903 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.52■■□□□ 1.2
HLA-DRAP01903 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DRAP01903 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.52■■□□□ 1.2
HLA-DRAP01903 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DRAP01903 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DRAP01903 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HLA-DRAP01903 AC137761.2-201ENST00000561729 223 ntBASIC22.52■■□□□ 1.2
HLA-DRAP01903 AC145350.3-201ENST00000569033 163 ntBASIC22.52■■□□□ 1.2
HLA-DRAP01903 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.52■■□□□ 1.2
HLA-DRAP01903 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HLA-DRAP01903 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HLA-DRAP01903 AL049796.1-201ENST00000565336 1766 ntBASIC22.51■■□□□ 1.19
HLA-DRAP01903 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HLA-DRAP01903 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
HLA-DRAP01903 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HLA-DRAP01903 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.51■■□□□ 1.19
HLA-DRAP01903 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.51■■□□□ 1.19
HLA-DRAP01903 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.5■■□□□ 1.19
HLA-DRAP01903 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HLA-DRAP01903 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DRAP01903 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DRAP01903 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 AC022517.1-201ENST00000592429 346 ntBASIC22.49■■□□□ 1.19
HLA-DRAP01903 MYCNOS-205ENST00000641950 531 ntBASIC22.49■■□□□ 1.19
HLA-DRAP01903 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DRAP01903 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DRAP01903 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HLA-DRAP01903 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.49■■□□□ 1.19
HLA-DRAP01903 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DRAP01903 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DRAP01903 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DRAP01903 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DRAP01903 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 SLC7A5P1-201ENST00000568957 537 ntBASIC22.48■■□□□ 1.19
HLA-DRAP01903 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HLA-DRAP01903 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
HLA-DRAP01903 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HLA-DRAP01903 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HLA-DRAP01903 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HLA-DRAP01903 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HLA-DRAP01903 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.47■■□□□ 1.19
HLA-DRAP01903 RARRES2P11-201ENST00000635158 484 ntBASIC22.47■■□□□ 1.19
HLA-DRAP01903 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
HLA-DRAP01903 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.47■■□□□ 1.19
HLA-DRAP01903 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
HLA-DRAP01903 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.47■■□□□ 1.19
HLA-DRAP01903 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.46■■□□□ 1.19
HLA-DRAP01903 AC016769.1-201ENST00000409132 1010 ntBASIC22.46■■□□□ 1.19
HLA-DRAP01903 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.46■■□□□ 1.19
HLA-DRAP01903 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
HLA-DRAP01903 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.46■■□□□ 1.19
HLA-DRAP01903 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.46■■□□□ 1.19
HLA-DRAP01903 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HLA-DRAP01903 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms