Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.2■■□□□ 1.3
CD4P01730 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.2■■□□□ 1.3
CD4P01730 AC060766.5-201ENST00000590539 871 ntBASIC23.2■■□□□ 1.3
CD4P01730 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.2■■□□□ 1.3
CD4P01730 AC139530.1-201ENST00000575312 1977 ntBASIC23.2■■□□□ 1.3
CD4P01730 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.19■■□□□ 1.3
CD4P01730 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CD4P01730 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.19■■□□□ 1.3
CD4P01730 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.19■■□□□ 1.3
CD4P01730 FAM21FP-204ENST00000608637 956 ntBASIC23.19■■□□□ 1.3
CD4P01730 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CD4P01730 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD4P01730 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CD4P01730 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CD4P01730 AC091799.1-201ENST00000422823 811 ntBASIC23.18■■□□□ 1.3
CD4P01730 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.18■■□□□ 1.3
CD4P01730 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CD4P01730 AC100791.3-201ENST00000617619 330 ntBASIC23.18■■□□□ 1.3
CD4P01730 HLA-B-256ENST00000639848 1089 ntBASIC23.18■■□□□ 1.3
CD4P01730 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD4P01730 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.18■■□□□ 1.3
CD4P01730 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CD4P01730 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.18■■□□□ 1.3
CD4P01730 AC127496.7-201ENST00000625110 1798 ntBASIC23.17■■□□□ 1.3
CD4P01730 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CD4P01730 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CD4P01730 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.17■■□□□ 1.3
CD4P01730 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.17■■□□□ 1.3
CD4P01730 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.17■■□□□ 1.3
CD4P01730 CYP2T3P-201ENST00000601990 817 ntBASIC23.17■■□□□ 1.3
CD4P01730 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.17■■□□□ 1.3
CD4P01730 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD4P01730 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.16■■□□□ 1.3
CD4P01730 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CD4P01730 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CD4P01730 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CD4P01730 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CD4P01730 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.16■■□□□ 1.3
CD4P01730 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CD4P01730 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.15■■□□□ 1.3
CD4P01730 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CD4P01730 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CD4P01730 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.15■■□□□ 1.3
CD4P01730 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CD4P01730 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CD4P01730 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CD4P01730 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CD4P01730 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.15■■□□□ 1.3
CD4P01730 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
CD4P01730 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.15■■□□□ 1.3
CD4P01730 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CD4P01730 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CD4P01730 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
CD4P01730 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CD4P01730 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.14■■□□□ 1.29
CD4P01730 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD4P01730 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.14■■□□□ 1.29
CD4P01730 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD4P01730 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.14■■□□□ 1.29
CD4P01730 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.14■■□□□ 1.29
CD4P01730 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CD4P01730 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.14■■□□□ 1.29
CD4P01730 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.14■■□□□ 1.29
CD4P01730 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CD4P01730 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD4P01730 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD4P01730 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD4P01730 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD4P01730 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CD4P01730 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.13■■□□□ 1.29
CD4P01730 RPPH1-201ENST00000516869 333 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms