Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PDGFBP01127 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.26■□□□□ 0.99
PDGFBP01127 MCRIP2P1-201ENST00000394346 511 ntBASIC21.26■□□□□ 0.99
PDGFBP01127 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDGFBP01127 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.26■□□□□ 0.99
PDGFBP01127 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDGFBP01127 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 MTDHP1-201ENST00000605323 784 ntBASIC21.26■□□□□ 0.99
PDGFBP01127 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.26■□□□□ 0.99
PDGFBP01127 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
PDGFBP01127 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.26■□□□□ 0.99
PDGFBP01127 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDGFBP01127 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFBP01127 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.25■□□□□ 0.99
PDGFBP01127 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.25■□□□□ 0.99
PDGFBP01127 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.25■□□□□ 0.99
PDGFBP01127 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDGFBP01127 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFBP01127 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDGFBP01127 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDGFBP01127 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.25■□□□□ 0.99
PDGFBP01127 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.25■□□□□ 0.99
PDGFBP01127 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PDGFBP01127 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFBP01127 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDGFBP01127 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.24■□□□□ 0.99
PDGFBP01127 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PDGFBP01127 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.24■□□□□ 0.99
PDGFBP01127 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 KRT18P68-201ENST00000392293 1000 ntBASIC21.24■□□□□ 0.99
PDGFBP01127 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PDGFBP01127 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDGFBP01127 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
PDGFBP01127 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDGFBP01127 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFBP01127 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFBP01127 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFBP01127 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFBP01127 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFBP01127 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 AP001412.1-201ENST00000608405 714 ntBASIC21.23■□□□□ 0.99
PDGFBP01127 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.23■□□□□ 0.99
PDGFBP01127 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.23■□□□□ 0.99
PDGFBP01127 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDGFBP01127 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
PDGFBP01127 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDGFBP01127 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.22■□□□□ 0.99
PDGFBP01127 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.22■□□□□ 0.99
PDGFBP01127 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.22■□□□□ 0.99
PDGFBP01127 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.22■□□□□ 0.99
PDGFBP01127 AL353708.3-201ENST00000610272 989 ntBASIC21.22■□□□□ 0.99
PDGFBP01127 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDGFBP01127 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.22■□□□□ 0.99
PDGFBP01127 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDGFBP01127 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDGFBP01127 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFBP01127 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.21■□□□□ 0.99
PDGFBP01127 CDV3P1-201ENST00000471403 739 ntBASIC21.21■□□□□ 0.99
PDGFBP01127 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFBP01127 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.21■□□□□ 0.99
PDGFBP01127 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.21■□□□□ 0.99
PDGFBP01127 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.21■□□□□ 0.99
PDGFBP01127 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.21■□□□□ 0.99
PDGFBP01127 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.21■□□□□ 0.99
PDGFBP01127 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.21■□□□□ 0.99
PDGFBP01127 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFBP01127 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDGFBP01127 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.21■□□□□ 0.99
PDGFBP01127 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms