Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.4■■□□□ 1.34
PGK1P00558 FAM197Y4-202ENST00000622692 608 ntBASIC23.4■■□□□ 1.34
PGK1P00558 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PGK1P00558 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.4■■□□□ 1.34
PGK1P00558 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.39■■□□□ 1.34
PGK1P00558 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
PGK1P00558 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
PGK1P00558 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PGK1P00558 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.39■■□□□ 1.33
PGK1P00558 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.39■■□□□ 1.33
PGK1P00558 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.39■■□□□ 1.33
PGK1P00558 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.39■■□□□ 1.33
PGK1P00558 PNMA6B-201ENST00000538162 1200 ntBASIC23.39■■□□□ 1.33
PGK1P00558 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.39■■□□□ 1.33
PGK1P00558 AL589743.5-201ENST00000616611 1050 ntBASIC23.39■■□□□ 1.33
PGK1P00558 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PGK1P00558 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PGK1P00558 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.39■■□□□ 1.33
PGK1P00558 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.39■■□□□ 1.33
PGK1P00558 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
PGK1P00558 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
PGK1P00558 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.38■■□□□ 1.33
PGK1P00558 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.38■■□□□ 1.33
PGK1P00558 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.38■■□□□ 1.33
PGK1P00558 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.38■■□□□ 1.33
PGK1P00558 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.38■■□□□ 1.33
PGK1P00558 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PGK1P00558 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.38■■□□□ 1.33
PGK1P00558 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PGK1P00558 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 AC092368.3-202ENST00000574180 1591 ntBASIC23.37■■□□□ 1.33
PGK1P00558 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 MCRIP2P1-201ENST00000394346 511 ntBASIC23.37■■□□□ 1.33
PGK1P00558 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 AC233263.1-201ENST00000578059 224 ntBASIC23.37■■□□□ 1.33
PGK1P00558 C11orf96-202ENST00000528572 1834 ntBASIC23.37■■□□□ 1.33
PGK1P00558 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
PGK1P00558 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.37■■□□□ 1.33
PGK1P00558 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PGK1P00558 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.36■■□□□ 1.33
PGK1P00558 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
PGK1P00558 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PGK1P00558 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 AC026471.6-201ENST00000622954 1905 ntBASIC23.36■■□□□ 1.33
PGK1P00558 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
PGK1P00558 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.36■■□□□ 1.33
PGK1P00558 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.36■■□□□ 1.33
PGK1P00558 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.36■■□□□ 1.33
PGK1P00558 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.36■■□□□ 1.33
PGK1P00558 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PGK1P00558 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PGK1P00558 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PGK1P00558 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PGK1P00558 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PGK1P00558 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PGK1P00558 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.35■■□□□ 1.33
PGK1P00558 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PGK1P00558 MIR718-201ENST00000390190 70 ntBASIC23.35■■□□□ 1.33
PGK1P00558 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PGK1P00558 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.35■■□□□ 1.33
PGK1P00558 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PGK1P00558 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.35■■□□□ 1.33
PGK1P00558 AC092053.2-201ENST00000640557 1818 ntBASIC23.35■■□□□ 1.33
PGK1P00558 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PGK1P00558 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.35■■□□□ 1.33
PGK1P00558 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PGK1P00558 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PGK1P00558 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PGK1P00558 KRT17P3-201ENST00000420566 1262 ntBASIC23.34■■□□□ 1.33
PGK1P00558 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.34■■□□□ 1.33
PGK1P00558 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.34■■□□□ 1.33
PGK1P00558 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.34■■□□□ 1.33
PGK1P00558 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.34■■□□□ 1.33
PGK1P00558 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.34■■□□□ 1.33
PGK1P00558 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.34■■□□□ 1.33
PGK1P00558 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
PGK1P00558 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.33■■□□□ 1.33
PGK1P00558 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PGK1P00558 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.33■■□□□ 1.33
PGK1P00558 KRT18P68-201ENST00000392293 1000 ntBASIC23.33■■□□□ 1.33
PGK1P00558 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms