Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SFT2D2O95562 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.34■□□□□ 0.37
SFT2D2O95562 AC007225.1-201ENST00000566331 1836 ntBASIC17.34■□□□□ 0.37
SFT2D2O95562 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 HSD17B1P1-201ENST00000590052 955 ntBASIC17.34■□□□□ 0.37
SFT2D2O95562 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 AC121338.2-201ENST00000622535 1744 ntBASIC17.34■□□□□ 0.37
SFT2D2O95562 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SFT2D2O95562 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SFT2D2O95562 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.33■□□□□ 0.37
SFT2D2O95562 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
SFT2D2O95562 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SFT2D2O95562 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.33■□□□□ 0.37
SFT2D2O95562 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.33■□□□□ 0.37
SFT2D2O95562 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.33■□□□□ 0.37
SFT2D2O95562 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SFT2D2O95562 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SFT2D2O95562 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SFT2D2O95562 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SFT2D2O95562 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SFT2D2O95562 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.33■□□□□ 0.36
SFT2D2O95562 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.32■□□□□ 0.36
SFT2D2O95562 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.32■□□□□ 0.36
SFT2D2O95562 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SFT2D2O95562 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 BX664725.1-201ENST00000438252 379 ntBASIC17.32■□□□□ 0.36
SFT2D2O95562 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 AC241377.3-202ENST00000626088 1088 ntBASIC17.32■□□□□ 0.36
SFT2D2O95562 AC241585.3-202ENST00000628937 1088 ntBASIC17.32■□□□□ 0.36
SFT2D2O95562 AC245100.8-202ENST00000629247 1058 ntBASIC17.32■□□□□ 0.36
SFT2D2O95562 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
SFT2D2O95562 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SFT2D2O95562 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SFT2D2O95562 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 AL162377.1-201ENST00000618844 1793 ntBASIC17.31■□□□□ 0.36
SFT2D2O95562 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.31■□□□□ 0.36
SFT2D2O95562 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SFT2D2O95562 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.31■□□□□ 0.36
SFT2D2O95562 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.31■□□□□ 0.36
SFT2D2O95562 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.31■□□□□ 0.36
SFT2D2O95562 AC010141.3-201ENST00000456659 717 ntBASIC17.31■□□□□ 0.36
SFT2D2O95562 AL031848.2-201ENST00000607670 837 ntBASIC17.31■□□□□ 0.36
SFT2D2O95562 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.31■□□□□ 0.36
SFT2D2O95562 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SFT2D2O95562 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 AC087289.5-201ENST00000586076 3175 ntBASIC17.31■□□□□ 0.36
SFT2D2O95562 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SFT2D2O95562 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SFT2D2O95562 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SFT2D2O95562 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.3■□□□□ 0.36
SFT2D2O95562 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.3■□□□□ 0.36
SFT2D2O95562 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.3■□□□□ 0.36
SFT2D2O95562 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SFT2D2O95562 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SFT2D2O95562 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.3■□□□□ 0.36
SFT2D2O95562 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SFT2D2O95562 AC092028.1-203ENST00000608262 953 ntBASIC17.3■□□□□ 0.36
SFT2D2O95562 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SFT2D2O95562 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.3■□□□□ 0.36
SFT2D2O95562 KRT8P33-201ENST00000508125 1423 ntBASIC17.3■□□□□ 0.36
SFT2D2O95562 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFT2D2O95562 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.29■□□□□ 0.36
SFT2D2O95562 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SFT2D2O95562 AP004607.7-201ENST00000527152 1677 ntBASIC17.29■□□□□ 0.36
SFT2D2O95562 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SFT2D2O95562 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SFT2D2O95562 AC112907.3-201ENST00000577781 2400 ntBASIC17.29■□□□□ 0.36
SFT2D2O95562 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFT2D2O95562 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFT2D2O95562 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SFT2D2O95562 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms