Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 FEM1AP1-201ENST00000431297 1995 ntBASIC18.48■□□□□ 0.55
ZNF254O75437 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF254O75437 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF254O75437 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
ZNF254O75437 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF254O75437 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF254O75437 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.48■□□□□ 0.55
ZNF254O75437 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF254O75437 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF254O75437 AL136162.1-201ENST00000607711 1078 ntBASIC18.48■□□□□ 0.55
ZNF254O75437 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF254O75437 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF254O75437 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF254O75437 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.48■□□□□ 0.55
ZNF254O75437 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF254O75437 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.47■□□□□ 0.55
ZNF254O75437 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF254O75437 AC024257.2-201ENST00000549699 147 ntBASIC18.47■□□□□ 0.55
ZNF254O75437 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF254O75437 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF254O75437 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF254O75437 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 AC135279.3-201ENST00000610945 1311 ntBASIC18.47■□□□□ 0.55
ZNF254O75437 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF254O75437 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF254O75437 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ZNF254O75437 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF254O75437 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ZNF254O75437 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ZNF254O75437 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF254O75437 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF254O75437 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.46■□□□□ 0.54
ZNF254O75437 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF254O75437 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF254O75437 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF254O75437 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ZNF254O75437 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF254O75437 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF254O75437 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF254O75437 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ZNF254O75437 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ZNF254O75437 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF254O75437 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF254O75437 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF254O75437 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF254O75437 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF254O75437 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ZNF254O75437 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF254O75437 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZNF254O75437 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF254O75437 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms