Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.64■□□□□ 0.73
CTNSO60931 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.64■□□□□ 0.73
CTNSO60931 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.64■□□□□ 0.73
CTNSO60931 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.64■□□□□ 0.73
CTNSO60931 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNSO60931 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTNSO60931 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTNSO60931 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNSO60931 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNSO60931 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNSO60931 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNSO60931 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.63■□□□□ 0.73
CTNSO60931 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNSO60931 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.63■□□□□ 0.73
CTNSO60931 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNSO60931 BID-214ENST00000617586 542 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNSO60931 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNSO60931 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNSO60931 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNSO60931 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.62■□□□□ 0.73
CTNSO60931 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.62■□□□□ 0.73
CTNSO60931 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNSO60931 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTNSO60931 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNSO60931 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNSO60931 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CTNSO60931 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.62■□□□□ 0.73
CTNSO60931 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.62■□□□□ 0.73
CTNSO60931 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTNSO60931 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.62■□□□□ 0.73
CTNSO60931 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNSO60931 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 AC004911.1-201ENST00000416316 871 ntBASIC19.61■□□□□ 0.73
CTNSO60931 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNSO60931 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNSO60931 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.61■□□□□ 0.73
CTNSO60931 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNSO60931 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNSO60931 AC011767.1-201ENST00000617410 1153 ntBASIC19.61■□□□□ 0.73
CTNSO60931 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.61■□□□□ 0.73
CTNSO60931 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNSO60931 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNSO60931 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CTNSO60931 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CTNSO60931 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.6■□□□□ 0.73
CTNSO60931 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNSO60931 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.6■□□□□ 0.73
CTNSO60931 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTNSO60931 MFSD11-216ENST00000590393 1141 ntBASIC19.6■□□□□ 0.73
CTNSO60931 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CTNSO60931 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
CTNSO60931 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNSO60931 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CTNSO60931 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.59■□□□□ 0.73
CTNSO60931 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CTNSO60931 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTNSO60931 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 AC245052.3-201ENST00000450182 901 ntBASIC19.59■□□□□ 0.73
CTNSO60931 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.59■□□□□ 0.73
CTNSO60931 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 AC243732.1-201ENST00000612648 864 ntBASIC19.59■□□□□ 0.73
CTNSO60931 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNSO60931 AC010536.3-201ENST00000620306 533 ntBASIC19.59■□□□□ 0.73
CTNSO60931 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CTNSO60931 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNSO60931 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNSO60931 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNSO60931 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.58■□□□□ 0.73
CTNSO60931 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 TERF1P5-201ENST00000477545 1207 ntBASIC19.58■□□□□ 0.72
CTNSO60931 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.58■□□□□ 0.72
CTNSO60931 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNSO60931 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms