Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.48■□□□□ 0.71
HCN1O60741 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.48■□□□□ 0.71
HCN1O60741 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HCN1O60741 AC004854.2-201ENST00000608450 1441 ntBASIC19.48■□□□□ 0.71
HCN1O60741 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.48■□□□□ 0.71
HCN1O60741 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HCN1O60741 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HCN1O60741 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.47■□□□□ 0.71
HCN1O60741 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.47■□□□□ 0.71
HCN1O60741 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.47■□□□□ 0.71
HCN1O60741 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 AC137761.2-201ENST00000561729 223 ntBASIC19.47■□□□□ 0.71
HCN1O60741 AC145350.3-201ENST00000569033 163 ntBASIC19.47■□□□□ 0.71
HCN1O60741 KRT18P61-201ENST00000585825 1298 ntBASIC19.47■□□□□ 0.71
HCN1O60741 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.47■□□□□ 0.71
HCN1O60741 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HCN1O60741 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.47■□□□□ 0.71
HCN1O60741 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.47■□□□□ 0.71
HCN1O60741 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.47■□□□□ 0.71
HCN1O60741 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HCN1O60741 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HCN1O60741 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HCN1O60741 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 AC016769.1-201ENST00000409132 1010 ntBASIC19.46■□□□□ 0.71
HCN1O60741 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.46■□□□□ 0.71
HCN1O60741 AC090192.1-201ENST00000517740 490 ntBASIC19.46■□□□□ 0.71
HCN1O60741 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN1O60741 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN1O60741 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.46■□□□□ 0.71
HCN1O60741 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HCN1O60741 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HCN1O60741 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN1O60741 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
HCN1O60741 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.45■□□□□ 0.7
HCN1O60741 AC006015.1-201ENST00000429970 570 ntBASIC19.45■□□□□ 0.7
HCN1O60741 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.45■□□□□ 0.7
HCN1O60741 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.45■□□□□ 0.7
HCN1O60741 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.45■□□□□ 0.7
HCN1O60741 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN1O60741 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.44■□□□□ 0.7
HCN1O60741 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
HCN1O60741 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HCN1O60741 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
HCN1O60741 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
HCN1O60741 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCN1O60741 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.44■□□□□ 0.7
HCN1O60741 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.44■□□□□ 0.7
HCN1O60741 AL034346.1-201ENST00000568244 1277 ntBASIC19.44■□□□□ 0.7
HCN1O60741 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
HCN1O60741 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN1O60741 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HCN1O60741 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN1O60741 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.44■□□□□ 0.7
HCN1O60741 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN1O60741 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HCN1O60741 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN1O60741 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN1O60741 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HCN1O60741 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 AC092667.1-201ENST00000434301 2586 ntBASIC19.43■□□□□ 0.7
HCN1O60741 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HCN1O60741 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN1O60741 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN1O60741 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN1O60741 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN1O60741 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN1O60741 KRT87P-202ENST00000534226 1464 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms