Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.54■■□□□ 1.52
CTNND1O60716 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CTNND1O60716 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.54■■□□□ 1.52
CTNND1O60716 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
CTNND1O60716 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
CTNND1O60716 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CTNND1O60716 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.54■■□□□ 1.52
CTNND1O60716 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CTNND1O60716 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CTNND1O60716 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CTNND1O60716 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CTNND1O60716 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.53■■□□□ 1.52
CTNND1O60716 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CTNND1O60716 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.53■■□□□ 1.52
CTNND1O60716 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CTNND1O60716 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
CTNND1O60716 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CTNND1O60716 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.53■■□□□ 1.52
CTNND1O60716 AP003097.1-201ENST00000530657 1135 ntBASIC24.53■■□□□ 1.52
CTNND1O60716 AC142381.4-202ENST00000563973 229 ntBASIC24.53■■□□□ 1.52
CTNND1O60716 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.53■■□□□ 1.52
CTNND1O60716 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CTNND1O60716 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.53■■□□□ 1.52
CTNND1O60716 C11orf96-202ENST00000528572 1834 ntBASIC24.53■■□□□ 1.52
CTNND1O60716 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CTNND1O60716 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CTNND1O60716 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CTNND1O60716 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
CTNND1O60716 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.52■■□□□ 1.52
CTNND1O60716 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CTNND1O60716 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.52■■□□□ 1.52
CTNND1O60716 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CTNND1O60716 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
CTNND1O60716 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.52■■□□□ 1.52
CTNND1O60716 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.52■■□□□ 1.52
CTNND1O60716 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CTNND1O60716 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CTNND1O60716 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CTNND1O60716 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CTNND1O60716 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
CTNND1O60716 MCRIP2P1-201ENST00000394346 511 ntBASIC24.51■■□□□ 1.51
CTNND1O60716 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.51■■□□□ 1.51
CTNND1O60716 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.51■■□□□ 1.51
CTNND1O60716 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.51■■□□□ 1.51
CTNND1O60716 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.51■■□□□ 1.51
CTNND1O60716 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CTNND1O60716 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
CTNND1O60716 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CTNND1O60716 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.5■■□□□ 1.51
CTNND1O60716 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CTNND1O60716 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CTNND1O60716 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CTNND1O60716 AL158047.1-201ENST00000445918 881 ntBASIC24.5■■□□□ 1.51
CTNND1O60716 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.5■■□□□ 1.51
CTNND1O60716 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CTNND1O60716 AC010542.4-201ENST00000563151 1910 ntBASIC24.5■■□□□ 1.51
CTNND1O60716 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CTNND1O60716 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.5■■□□□ 1.51
CTNND1O60716 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.5■■□□□ 1.51
CTNND1O60716 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CTNND1O60716 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.49■■□□□ 1.51
CTNND1O60716 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CTNND1O60716 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.49■■□□□ 1.51
CTNND1O60716 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.49■■□□□ 1.51
CTNND1O60716 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.49■■□□□ 1.51
CTNND1O60716 AL589743.5-201ENST00000616611 1050 ntBASIC24.49■■□□□ 1.51
CTNND1O60716 AC073648.6-201ENST00000641589 218 ntBASIC24.49■■□□□ 1.51
CTNND1O60716 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.49■■□□□ 1.51
CTNND1O60716 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CTNND1O60716 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.48■■□□□ 1.51
CTNND1O60716 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.48■■□□□ 1.51
CTNND1O60716 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 AC060766.5-201ENST00000590539 871 ntBASIC24.48■■□□□ 1.51
CTNND1O60716 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.48■■□□□ 1.51
CTNND1O60716 HLA-B-256ENST00000639848 1089 ntBASIC24.48■■□□□ 1.51
CTNND1O60716 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CTNND1O60716 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CTNND1O60716 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CTNND1O60716 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CTNND1O60716 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms