Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.6■□□□□ 0.89
GFRA3O60609 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
GFRA3O60609 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
GFRA3O60609 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 WWOX-216ENST00000569818 525 ntBASIC20.6■□□□□ 0.89
GFRA3O60609 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.6■□□□□ 0.89
GFRA3O60609 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.6■□□□□ 0.89
GFRA3O60609 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.6■□□□□ 0.89
GFRA3O60609 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 KRT8P9-201ENST00000558927 1449 ntBASIC20.6■□□□□ 0.89
GFRA3O60609 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFRA3O60609 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.59■□□□□ 0.89
GFRA3O60609 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.59■□□□□ 0.89
GFRA3O60609 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.59■□□□□ 0.89
GFRA3O60609 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GFRA3O60609 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.59■□□□□ 0.89
GFRA3O60609 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.59■□□□□ 0.89
GFRA3O60609 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.59■□□□□ 0.89
GFRA3O60609 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 AL358472.4-201ENST00000633140 710 ntBASIC20.59■□□□□ 0.89
GFRA3O60609 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.59■□□□□ 0.89
GFRA3O60609 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GFRA3O60609 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GFRA3O60609 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GFRA3O60609 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GFRA3O60609 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
GFRA3O60609 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 AL034346.1-201ENST00000568244 1277 ntBASIC20.58■□□□□ 0.89
GFRA3O60609 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.58■□□□□ 0.89
GFRA3O60609 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.58■□□□□ 0.89
GFRA3O60609 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GFRA3O60609 AC073508.3-201ENST00000619697 1419 ntBASIC20.58■□□□□ 0.88
GFRA3O60609 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.58■□□□□ 0.88
GFRA3O60609 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.58■□□□□ 0.88
GFRA3O60609 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
GFRA3O60609 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GFRA3O60609 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 KRT18P68-201ENST00000392293 1000 ntBASIC20.57■□□□□ 0.88
GFRA3O60609 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.57■□□□□ 0.88
GFRA3O60609 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.57■□□□□ 0.88
GFRA3O60609 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.57■□□□□ 0.88
GFRA3O60609 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.57■□□□□ 0.88
GFRA3O60609 AC079089.2-201ENST00000531211 1277 ntBASIC20.57■□□□□ 0.88
GFRA3O60609 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.57■□□□□ 0.88
GFRA3O60609 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GFRA3O60609 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.57■□□□□ 0.88
GFRA3O60609 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.57■□□□□ 0.88
GFRA3O60609 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GFRA3O60609 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
GFRA3O60609 KRT18P22-201ENST00000402024 1347 ntBASIC20.56■□□□□ 0.88
GFRA3O60609 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
GFRA3O60609 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.56■□□□□ 0.88
GFRA3O60609 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GFRA3O60609 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
GFRA3O60609 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.56■□□□□ 0.88
GFRA3O60609 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.56■□□□□ 0.88
GFRA3O60609 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
GFRA3O60609 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
GFRA3O60609 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.55■□□□□ 0.88
GFRA3O60609 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
GFRA3O60609 AP006587.3-201ENST00000525742 1516 ntBASIC20.55■□□□□ 0.88
GFRA3O60609 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GFRA3O60609 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GFRA3O60609 CDV3P1-201ENST00000471403 739 ntBASIC20.55■□□□□ 0.88
GFRA3O60609 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.55■□□□□ 0.88
GFRA3O60609 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms