Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF9O60383 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.52■□□□□ 0.88
GDF9O60383 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 ARMC10P1-201ENST00000313754 855 ntBASIC20.52■□□□□ 0.88
GDF9O60383 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF9O60383 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF9O60383 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.52■□□□□ 0.88
GDF9O60383 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GDF9O60383 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF9O60383 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.52■□□□□ 0.88
GDF9O60383 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.52■□□□□ 0.88
GDF9O60383 AC012306.2-201ENST00000609350 630 ntBASIC20.52■□□□□ 0.88
GDF9O60383 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDF9O60383 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GDF9O60383 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GDF9O60383 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GDF9O60383 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
GDF9O60383 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
GDF9O60383 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
GDF9O60383 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GDF9O60383 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 AL049637.2-201ENST00000641778 930 ntBASIC20.51■□□□□ 0.87
GDF9O60383 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GDF9O60383 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GDF9O60383 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GDF9O60383 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GDF9O60383 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GDF9O60383 TMPOP1-202ENST00000424642 1267 ntBASIC20.5■□□□□ 0.87
GDF9O60383 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDF9O60383 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GDF9O60383 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
GDF9O60383 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.49■□□□□ 0.87
GDF9O60383 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GDF9O60383 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF9O60383 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GDF9O60383 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.49■□□□□ 0.87
GDF9O60383 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.49■□□□□ 0.87
GDF9O60383 AL589743.5-201ENST00000616611 1050 ntBASIC20.49■□□□□ 0.87
GDF9O60383 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GDF9O60383 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDF9O60383 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GDF9O60383 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.48■□□□□ 0.87
GDF9O60383 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
GDF9O60383 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GDF9O60383 POM121L13P-201ENST00000422362 380 ntBASIC20.48■□□□□ 0.87
GDF9O60383 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.48■□□□□ 0.87
GDF9O60383 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 RN7SL850P-201ENST00000579959 291 ntBASIC20.48■□□□□ 0.87
GDF9O60383 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GDF9O60383 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDF9O60383 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GDF9O60383 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
GDF9O60383 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF9O60383 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.47■□□□□ 0.87
GDF9O60383 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.47■□□□□ 0.87
GDF9O60383 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.47■□□□□ 0.87
GDF9O60383 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.47■□□□□ 0.87
GDF9O60383 FAM21FP-204ENST00000608637 956 ntBASIC20.47■□□□□ 0.87
GDF9O60383 AC100791.3-201ENST00000617619 330 ntBASIC20.47■□□□□ 0.87
GDF9O60383 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
GDF9O60383 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDF9O60383 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.47■□□□□ 0.87
GDF9O60383 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.47■□□□□ 0.87
GDF9O60383 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GDF9O60383 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
GDF9O60383 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDF9O60383 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms