Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP2AO43633 CROCCP5-201ENST00000436658 830 ntBASIC23.56■■□□□ 1.36
CHMP2AO43633 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.56■■□□□ 1.36
CHMP2AO43633 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.56■■□□□ 1.36
CHMP2AO43633 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP2AO43633 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
CHMP2AO43633 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.56■■□□□ 1.36
CHMP2AO43633 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP2AO43633 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP2AO43633 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.56■■□□□ 1.36
CHMP2AO43633 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP2AO43633 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CHMP2AO43633 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.55■■□□□ 1.36
CHMP2AO43633 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 CNN2P6-201ENST00000439038 900 ntBASIC23.55■■□□□ 1.36
CHMP2AO43633 TERF1P5-201ENST00000477545 1207 ntBASIC23.55■■□□□ 1.36
CHMP2AO43633 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.55■■□□□ 1.36
CHMP2AO43633 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CHMP2AO43633 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CHMP2AO43633 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.55■■□□□ 1.36
CHMP2AO43633 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.55■■□□□ 1.36
CHMP2AO43633 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.55■■□□□ 1.36
CHMP2AO43633 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHMP2AO43633 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP2AO43633 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CHMP2AO43633 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 AC244015.2-201ENST00000616358 1861 ntBASIC23.54■■□□□ 1.36
CHMP2AO43633 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CHMP2AO43633 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 AC007322.1-201ENST00000426983 750 ntBASIC23.54■■□□□ 1.36
CHMP2AO43633 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CHMP2AO43633 AC006970.2-201ENST00000450065 779 ntBASIC23.54■■□□□ 1.36
CHMP2AO43633 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP2AO43633 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP2AO43633 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.54■■□□□ 1.36
CHMP2AO43633 AC231657.2-201ENST00000624556 255 ntBASIC23.54■■□□□ 1.36
CHMP2AO43633 AC079834.2-201ENST00000609776 1949 ntBASIC23.54■■□□□ 1.36
CHMP2AO43633 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHMP2AO43633 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.53■■□□□ 1.36
CHMP2AO43633 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CHMP2AO43633 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CHMP2AO43633 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CHMP2AO43633 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.53■■□□□ 1.36
CHMP2AO43633 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.53■■□□□ 1.36
CHMP2AO43633 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.53■■□□□ 1.36
CHMP2AO43633 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.53■■□□□ 1.36
CHMP2AO43633 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.53■■□□□ 1.36
CHMP2AO43633 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.53■■□□□ 1.36
CHMP2AO43633 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.53■■□□□ 1.36
CHMP2AO43633 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.53■■□□□ 1.36
CHMP2AO43633 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHMP2AO43633 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.53■■□□□ 1.36
CHMP2AO43633 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHMP2AO43633 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.52■■□□□ 1.36
CHMP2AO43633 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.52■■□□□ 1.36
CHMP2AO43633 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHMP2AO43633 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP2AO43633 RBM17P2-201ENST00000616397 1405 ntBASIC23.51■■□□□ 1.35
CHMP2AO43633 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP2AO43633 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.51■■□□□ 1.35
CHMP2AO43633 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP2AO43633 AC005181.1-201ENST00000604782 1256 ntBASIC23.51■■□□□ 1.35
CHMP2AO43633 AC013268.1-206ENST00000638368 961 ntBASIC23.51■■□□□ 1.35
CHMP2AO43633 AC112229.1-201ENST00000639295 961 ntBASIC23.51■■□□□ 1.35
CHMP2AO43633 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHMP2AO43633 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms