Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.54■■□□□ 1.2
SOX1O00570 WWOX-216ENST00000569818 525 ntBASIC22.54■■□□□ 1.2
SOX1O00570 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.54■■□□□ 1.2
SOX1O00570 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SOX1O00570 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.54■■□□□ 1.2
SOX1O00570 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
SOX1O00570 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.53■■□□□ 1.2
SOX1O00570 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.53■■□□□ 1.2
SOX1O00570 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.53■■□□□ 1.2
SOX1O00570 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOX1O00570 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX1O00570 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SOX1O00570 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX1O00570 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.52■■□□□ 1.2
SOX1O00570 AL355355.2-201ENST00000442321 338 ntBASIC22.52■■□□□ 1.2
SOX1O00570 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.52■■□□□ 1.2
SOX1O00570 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.52■■□□□ 1.2
SOX1O00570 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
SOX1O00570 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SOX1O00570 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.52■■□□□ 1.2
SOX1O00570 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOX1O00570 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.19
SOX1O00570 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.51■■□□□ 1.19
SOX1O00570 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.51■■□□□ 1.19
SOX1O00570 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.51■■□□□ 1.19
SOX1O00570 MCRIP2P1-201ENST00000394346 511 ntBASIC22.51■■□□□ 1.19
SOX1O00570 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.51■■□□□ 1.19
SOX1O00570 KRT18P56-201ENST00000507275 550 ntBASIC22.51■■□□□ 1.19
SOX1O00570 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
SOX1O00570 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.51■■□□□ 1.19
SOX1O00570 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SOX1O00570 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.51■■□□□ 1.19
SOX1O00570 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SOX1O00570 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.51■■□□□ 1.19
SOX1O00570 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
SOX1O00570 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.51■■□□□ 1.19
SOX1O00570 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SOX1O00570 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOX1O00570 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.5■■□□□ 1.19
SOX1O00570 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.5■■□□□ 1.19
SOX1O00570 AL137013.1-201ENST00000432946 1228 ntBASIC22.5■■□□□ 1.19
SOX1O00570 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.5■■□□□ 1.19
SOX1O00570 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
SOX1O00570 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SOX1O00570 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 AL121749.1-202ENST00000609313 2153 ntBASIC22.5■■□□□ 1.19
SOX1O00570 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SOX1O00570 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
SOX1O00570 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.49■■□□□ 1.19
SOX1O00570 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
SOX1O00570 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.49■■□□□ 1.19
SOX1O00570 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.49■■□□□ 1.19
SOX1O00570 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SOX1O00570 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.49■■□□□ 1.19
SOX1O00570 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SOX1O00570 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.49■■□□□ 1.19
SOX1O00570 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.49■■□□□ 1.19
SOX1O00570 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.49■■□□□ 1.19
SOX1O00570 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.49■■□□□ 1.19
SOX1O00570 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SOX1O00570 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 AC145676.1-201ENST00000514988 2004 ntBASIC22.48■■□□□ 1.19
SOX1O00570 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
SOX1O00570 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms