Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBAL3A6NHL2 AP004607.7-201ENST00000527152 1677 ntBASIC18.72■□□□□ 0.59
TUBAL3A6NHL2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBAL3A6NHL2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBAL3A6NHL2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBAL3A6NHL2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 ABHD17AP1-201ENST00000358206 933 ntBASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 SLC29A4P1-201ENST00000398760 971 ntBASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 CD99P1-205ENST00000527459 561 ntBASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBAL3A6NHL2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 TSPY6P-201ENST00000448518 926 ntBASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 AC142086.2-201ENST00000569753 217 ntBASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 AL050303.2-201ENST00000619798 666 ntBASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBAL3A6NHL2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 FBXW4P1-201ENST00000426721 2239 ntBASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.69■□□□□ 0.58
TUBAL3A6NHL2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 OR7E47P-201ENST00000546390 1422 ntBASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 C11orf96-202ENST00000528572 1834 ntBASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 KRT18P20-201ENST00000548986 1279 ntBASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TUBAL3A6NHL2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AC010141.2-201ENST00000452426 721 ntBASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AL034346.1-201ENST00000568244 1277 ntBASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 TMEM191A-211ENST00000637163 1067 ntBASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AC007952.6-201ENST00000573168 2673 ntBASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AC003957.1-201ENST00000625108 2673 ntBASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBAL3A6NHL2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBAL3A6NHL2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBAL3A6NHL2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TUBAL3A6NHL2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBAL3A6NHL2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms