Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 AC098934.4-201ENST00000564127 592 ntBASIC31.15■■■□□ 2.58
HFM1A2PYH4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HFM1A2PYH4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HFM1A2PYH4 RARRES2P4-201ENST00000514074 484 ntBASIC31.15■■■□□ 2.58
HFM1A2PYH4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
HFM1A2PYH4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HFM1A2PYH4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HFM1A2PYH4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
HFM1A2PYH4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
HFM1A2PYH4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
HFM1A2PYH4 AL355802.2-201ENST00000402069 882 ntBASIC31.14■■■□□ 2.58
HFM1A2PYH4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
HFM1A2PYH4 FAM21FP-204ENST00000608637 956 ntBASIC31.14■■■□□ 2.58
HFM1A2PYH4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.14■■■□□ 2.57
HFM1A2PYH4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.13■■■□□ 2.57
HFM1A2PYH4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.13■■■□□ 2.57
HFM1A2PYH4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.13■■■□□ 2.57
HFM1A2PYH4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HFM1A2PYH4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
HFM1A2PYH4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
HFM1A2PYH4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
HFM1A2PYH4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HFM1A2PYH4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.12■■■□□ 2.57
HFM1A2PYH4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
HFM1A2PYH4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
HFM1A2PYH4 AC105036.2-201ENST00000569468 176 ntBASIC31.12■■■□□ 2.57
HFM1A2PYH4 AC069236.1-201ENST00000604339 616 ntBASIC31.12■■■□□ 2.57
HFM1A2PYH4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
HFM1A2PYH4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HFM1A2PYH4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
HFM1A2PYH4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
HFM1A2PYH4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
HFM1A2PYH4 AL512625.2-201ENST00000417533 625 ntBASIC31.11■■■□□ 2.57
HFM1A2PYH4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
HFM1A2PYH4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC31.11■■■□□ 2.57
HFM1A2PYH4 AL138781.1-201ENST00000566567 1274 ntBASIC31.11■■■□□ 2.57
HFM1A2PYH4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC31.11■■■□□ 2.57
HFM1A2PYH4 Z98882.1-201ENST00000622160 2253 ntBASIC31.11■■■□□ 2.57
HFM1A2PYH4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
HFM1A2PYH4 FBXW4P1-201ENST00000426721 2239 ntBASIC31.11■■■□□ 2.57
HFM1A2PYH4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.1■■■□□ 2.57
HFM1A2PYH4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC31.1■■■□□ 2.57
HFM1A2PYH4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC31.1■■■□□ 2.57
HFM1A2PYH4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HFM1A2PYH4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.1■■■□□ 2.57
HFM1A2PYH4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
HFM1A2PYH4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
HFM1A2PYH4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HFM1A2PYH4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC31.1■■■□□ 2.57
HFM1A2PYH4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HFM1A2PYH4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.09■■■□□ 2.57
HFM1A2PYH4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.09■■■□□ 2.57
HFM1A2PYH4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.09■■■□□ 2.57
HFM1A2PYH4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC31.09■■■□□ 2.57
HFM1A2PYH4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
HFM1A2PYH4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HFM1A2PYH4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HFM1A2PYH4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HFM1A2PYH4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HFM1A2PYH4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HFM1A2PYH4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
HFM1A2PYH4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC31.08■■■□□ 2.57
HFM1A2PYH4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.57
HFM1A2PYH4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.57
HFM1A2PYH4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC31.07■■■□□ 2.57
HFM1A2PYH4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HFM1A2PYH4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HFM1A2PYH4 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.07■■■□□ 2.56
HFM1A2PYH4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
HFM1A2PYH4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms