Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 C11orf96-202ENST00000528572 1834 ntBASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 AC026471.6-201ENST00000622954 1905 ntBASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 MCRIP2P1-201ENST00000394346 511 ntBASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 AC093827.2-201ENST00000512654 315 ntBASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV17A0A0B4J275 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 FAM99A-202ENST00000538190 1989 ntBASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 KRT17P1-201ENST00000399211 1546 ntBASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 AL355472.2-201ENST00000422958 438 ntBASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV17A0A0B4J275 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 UNC93B5-201ENST00000530315 699 ntBASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 AC006058.3-201ENST00000606217 1069 ntBASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV17A0A0B4J275 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 AC007322.3-201ENST00000426526 701 ntBASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 AP006294.2-201ENST00000641667 209 ntBASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 AC068473.5-201ENST00000616428 2072 ntBASIC18.95■□□□□ 0.62
TRAV17A0A0B4J275 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 AC026366.1-201ENST00000488803 879 ntBASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV17A0A0B4J275 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms