Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV26-1A0A087WT03 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV26-1A0A087WT03 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV26-1A0A087WT03 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.04■□□□□ -0
TRAV26-1A0A087WT03 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV26-1A0A087WT03 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 AC005224.4-201ENST00000583262 1652 ntBASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 AC087623.3-201ENST00000607047 1098 ntBASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV26-1A0A087WT03 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 AC026271.2-201ENST00000428091 497 ntBASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 CCDC92B-201ENST00000575506 885 ntBASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 MIR5787-201ENST00000611784 55 ntBASIC15.02■□□□□ -0
TRAV26-1A0A087WT03 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV26-1A0A087WT03 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 KRT18P14-201ENST00000534205 1250 ntBASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 AP006587.3-201ENST00000525742 1516 ntBASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV26-1A0A087WT03 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV26-1A0A087WT03 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms