Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.85■■□□□ 1.57
CYP46A1Q9Y6A2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.84■■□□□ 1.57
CYP46A1Q9Y6A2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CYP46A1Q9Y6A2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.83■■□□□ 1.56
CYP46A1Q9Y6A2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CYP46A1Q9Y6A2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CYP46A1Q9Y6A2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 AC027612.3-201ENST00000413684 1047 ntBASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CYP46A1Q9Y6A2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 AC079140.4-201ENST00000507448 529 ntBASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
CYP46A1Q9Y6A2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
CYP46A1Q9Y6A2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 AC061975.6-201ENST00000579045 1553 ntBASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CYP46A1Q9Y6A2 KRT87P-202ENST00000534226 1464 ntBASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.77■■□□□ 1.56
CYP46A1Q9Y6A2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms