Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RTCBQ9Y3I0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 AC245052.3-201ENST00000450182 901 ntBASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RTCBQ9Y3I0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RTCBQ9Y3I0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RTCBQ9Y3I0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.64■■□□□ 1.85
RTCBQ9Y3I0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 SNORA78-201ENST00000459373 127 ntBASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 AC233263.1-201ENST00000578059 224 ntBASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RTCBQ9Y3I0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.62■■□□□ 1.85
RTCBQ9Y3I0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 KRT18P68-201ENST00000392293 1000 ntBASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTCBQ9Y3I0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 SOX15-203ENST00000570788 1093 ntBASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTCBQ9Y3I0 REXO1L12P-201ENST00000622156 912 ntBASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms