Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF6Q9Y252 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF6Q9Y252 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF6Q9Y252 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF6Q9Y252 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF6Q9Y252 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF6Q9Y252 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.66■□□□□ 0.74
RNF6Q9Y252 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF6Q9Y252 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF6Q9Y252 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 AC105233.4-201ENST00000642045 216 ntBASIC19.65■□□□□ 0.74
RNF6Q9Y252 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF6Q9Y252 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF6Q9Y252 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF6Q9Y252 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF6Q9Y252 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF6Q9Y252 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RNF6Q9Y252 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF6Q9Y252 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF6Q9Y252 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF6Q9Y252 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF6Q9Y252 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF6Q9Y252 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.62■□□□□ 0.73
RNF6Q9Y252 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF6Q9Y252 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF6Q9Y252 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF6Q9Y252 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms