Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 CDV3P1-201ENST00000471403 739 ntBASIC27.54■■■□□ 2
SPG7Q9UQ90 UNC93B5-201ENST00000530315 699 ntBASIC27.54■■■□□ 2
SPG7Q9UQ90 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.54■■■□□ 2
SPG7Q9UQ90 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SPG7Q9UQ90 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.53■■■□□ 2
SPG7Q9UQ90 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SPG7Q9UQ90 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.53■■■□□ 2
SPG7Q9UQ90 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SPG7Q9UQ90 KRT17P1-201ENST00000399211 1546 ntBASIC27.53■■■□□ 2
SPG7Q9UQ90 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
SPG7Q9UQ90 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.53■■■□□ 2
SPG7Q9UQ90 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SPG7Q9UQ90 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SPG7Q9UQ90 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
SPG7Q9UQ90 AC128676.1-201ENST00000454392 318 ntBASIC27.52■■■□□ 2
SPG7Q9UQ90 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.52■■■□□ 2
SPG7Q9UQ90 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SPG7Q9UQ90 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.52■■■□□ 2
SPG7Q9UQ90 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPG7Q9UQ90 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
SPG7Q9UQ90 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.51■■■□□ 2
SPG7Q9UQ90 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 AC026366.1-201ENST00000488803 879 ntBASIC27.51■■□□□ 1.99
SPG7Q9UQ90 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 CYP2T3P-201ENST00000601990 817 ntBASIC27.51■■□□□ 1.99
SPG7Q9UQ90 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 AC026471.6-201ENST00000622954 1905 ntBASIC27.51■■□□□ 1.99
SPG7Q9UQ90 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPG7Q9UQ90 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 AP006294.2-201ENST00000641667 209 ntBASIC27.5■■□□□ 1.99
SPG7Q9UQ90 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 AC127496.7-201ENST00000625110 1798 ntBASIC27.5■■□□□ 1.99
SPG7Q9UQ90 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC27.5■■□□□ 1.99
SPG7Q9UQ90 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 AC080038.3-201ENST00000623346 1952 ntBASIC27.49■■□□□ 1.99
SPG7Q9UQ90 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SPG7Q9UQ90 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 AP003097.1-201ENST00000530657 1135 ntBASIC27.48■■□□□ 1.99
SPG7Q9UQ90 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 C11orf96-202ENST00000528572 1834 ntBASIC27.48■■□□□ 1.99
SPG7Q9UQ90 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
SPG7Q9UQ90 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 NME6-213ENST00000451657 871 ntTSL 2 BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 AC142381.4-202ENST00000563973 229 ntBASIC27.47■■□□□ 1.99
SPG7Q9UQ90 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 MMD2-204ENST00000612910 778 ntTSL 5 BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SPG7Q9UQ90 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 AL158047.1-201ENST00000445918 881 ntBASIC27.46■■□□□ 1.99
SPG7Q9UQ90 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SPG7Q9UQ90 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms