Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF1Q9UMS5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 AC055733.4-201ENST00000638462 1354 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L2-201ENST00000561772 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L6-201ENST00000626483 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L1-201ENST00000627662 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L8-201ENST00000629013 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L3-201ENST00000630187 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L7-201ENST00000630678 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 DUX4L5-201ENST00000630834 1275 ntBASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.54■■□□□ 1.04
PHTF1Q9UMS5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 LINC01521-201ENST00000504184 1943 ntBASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 AP006587.3-201ENST00000525742 1516 ntBASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PHTF1Q9UMS5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF1Q9UMS5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PHTF1Q9UMS5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF1Q9UMS5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF1Q9UMS5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms