Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 AL355472.2-201ENST00000422958 438 ntBASIC20.87■□□□□ 0.93
NCDNQ9UBB6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 AC069544.1-201ENST00000609399 999 ntBASIC20.87■□□□□ 0.93
NCDNQ9UBB6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCDNQ9UBB6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 AC233263.1-201ENST00000578059 224 ntBASIC20.86■□□□□ 0.93
NCDNQ9UBB6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 KRT16P2-201ENST00000414673 1423 ntBASIC20.86■□□□□ 0.93
NCDNQ9UBB6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCDNQ9UBB6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 ARMC10P1-201ENST00000313754 855 ntBASIC20.85■□□□□ 0.93
NCDNQ9UBB6 AC087499.1-201ENST00000418141 1075 ntBASIC20.85■□□□□ 0.93
NCDNQ9UBB6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 AC233702.5-201ENST00000584107 538 ntBASIC20.85■□□□□ 0.93
NCDNQ9UBB6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 OR7E47P-201ENST00000546390 1422 ntBASIC20.85■□□□□ 0.93
NCDNQ9UBB6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCDNQ9UBB6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 RPS2P55-201ENST00000397318 883 ntBASIC20.84■□□□□ 0.93
NCDNQ9UBB6 RCN1P1-201ENST00000400413 996 ntBASIC20.84■□□□□ 0.93
NCDNQ9UBB6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 AC107956.1-201ENST00000494359 873 ntBASIC20.84■□□□□ 0.93
NCDNQ9UBB6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCDNQ9UBB6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.83■□□□□ 0.93
NCDNQ9UBB6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 SOX15-203ENST00000570788 1093 ntBASIC20.83■□□□□ 0.93
NCDNQ9UBB6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.83■□□□□ 0.93
NCDNQ9UBB6 AP001412.1-201ENST00000608405 714 ntBASIC20.83■□□□□ 0.93
NCDNQ9UBB6 AC243732.1-201ENST00000612648 864 ntBASIC20.83■□□□□ 0.93
NCDNQ9UBB6 AP006587.3-201ENST00000525742 1516 ntBASIC20.83■□□□□ 0.92
NCDNQ9UBB6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
NCDNQ9UBB6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NCDNQ9UBB6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms