Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.41■■□□□ 1.18
CISHQ9NSE2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.41■■□□□ 1.18
CISHQ9NSE2 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.41■■□□□ 1.18
CISHQ9NSE2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.41■■□□□ 1.18
CISHQ9NSE2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CISHQ9NSE2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.41■■□□□ 1.18
CISHQ9NSE2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CISHQ9NSE2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CISHQ9NSE2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CISHQ9NSE2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 CLDN5-201ENST00000403084 2357 ntBASIC22.4■■□□□ 1.18
CISHQ9NSE2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 KRT18P20-201ENST00000548986 1279 ntBASIC22.4■■□□□ 1.18
CISHQ9NSE2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CISHQ9NSE2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.4■■□□□ 1.18
CISHQ9NSE2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CISHQ9NSE2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CISHQ9NSE2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CISHQ9NSE2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.39■■□□□ 1.18
CISHQ9NSE2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.39■■□□□ 1.18
CISHQ9NSE2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CISHQ9NSE2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CISHQ9NSE2 AF106564.1-201ENST00000607058 2553 ntBASIC22.39■■□□□ 1.17
CISHQ9NSE2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CISHQ9NSE2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.39■■□□□ 1.17
CISHQ9NSE2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.39■■□□□ 1.17
CISHQ9NSE2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.39■■□□□ 1.17
CISHQ9NSE2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CISHQ9NSE2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CISHQ9NSE2 KRT16P2-201ENST00000414673 1423 ntBASIC22.39■■□□□ 1.17
CISHQ9NSE2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CISHQ9NSE2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 AC120498.10-201ENST00000621827 505 ntBASIC22.38■■□□□ 1.17
CISHQ9NSE2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CISHQ9NSE2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CISHQ9NSE2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CISHQ9NSE2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.37■■□□□ 1.17
CISHQ9NSE2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CISHQ9NSE2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CISHQ9NSE2 AC137761.2-201ENST00000561729 223 ntBASIC22.37■■□□□ 1.17
CISHQ9NSE2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.37■■□□□ 1.17
CISHQ9NSE2 AC145350.3-201ENST00000569033 163 ntBASIC22.37■■□□□ 1.17
CISHQ9NSE2 UBE2DNL-204ENST00000602536 740 ntBASIC22.37■■□□□ 1.17
CISHQ9NSE2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CISHQ9NSE2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CISHQ9NSE2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CISHQ9NSE2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 AC022517.1-201ENST00000592429 346 ntBASIC22.36■■□□□ 1.17
CISHQ9NSE2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CISHQ9NSE2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CISHQ9NSE2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 AL137060.1-201ENST00000618151 2648 ntBASIC22.35■■□□□ 1.17
CISHQ9NSE2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CISHQ9NSE2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CISHQ9NSE2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CISHQ9NSE2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.34■■□□□ 1.17
CISHQ9NSE2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CISHQ9NSE2 AC005229.4-201ENST00000610085 2198 ntBASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms