Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.23■□□□□ 0.67
SDHAF3Q9NRP4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SDHAF3Q9NRP4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.21■□□□□ 0.67
SDHAF3Q9NRP4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 KRT16P2-201ENST00000414673 1423 ntBASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 KRT18P61-201ENST00000585825 1298 ntBASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SDHAF3Q9NRP4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 AC022517.1-201ENST00000592429 346 ntBASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDHAF3Q9NRP4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDHAF3Q9NRP4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms