Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC52A3Q9NQ40 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC52A3Q9NQ40 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 AL391422.3-201ENST00000603791 2761 ntBASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 AL356441.2-201ENST00000443009 864 ntBASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC52A3Q9NQ40 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 BX842568.3-201ENST00000418104 571 ntBASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 AC131281.2-201ENST00000520478 145 ntBASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC52A3Q9NQ40 BX005040.4-201ENST00000637145 1518 ntBASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SLC52A3Q9NQ40 AFG3L1P-217ENST00000557444 2447 ntBASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 AC009237.3-201ENST00000393279 1427 ntBASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC52A3Q9NQ40 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms