Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD248Q9HCU0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
CD248Q9HCU0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CD248Q9HCU0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.91■■□□□ 1.1
CD248Q9HCU0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.91■■□□□ 1.1
CD248Q9HCU0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.91■■□□□ 1.1
CD248Q9HCU0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD248Q9HCU0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.9■■□□□ 1.1
CD248Q9HCU0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD248Q9HCU0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.9■■□□□ 1.1
CD248Q9HCU0 C11orf96-202ENST00000528572 1834 ntBASIC21.9■■□□□ 1.1
CD248Q9HCU0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD248Q9HCU0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.89■■□□□ 1.1
CD248Q9HCU0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD248Q9HCU0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD248Q9HCU0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD248Q9HCU0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CD248Q9HCU0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD248Q9HCU0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 AC104771.1-201ENST00000603335 964 ntBASIC21.88■■□□□ 1.09
CD248Q9HCU0 AC011767.1-201ENST00000617410 1153 ntBASIC21.88■■□□□ 1.09
CD248Q9HCU0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD248Q9HCU0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.88■■□□□ 1.09
CD248Q9HCU0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CD248Q9HCU0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
CD248Q9HCU0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD248Q9HCU0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD248Q9HCU0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD248Q9HCU0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.87■■□□□ 1.09
CD248Q9HCU0 AC009237.3-201ENST00000393279 1427 ntBASIC21.87■■□□□ 1.09
CD248Q9HCU0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD248Q9HCU0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD248Q9HCU0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD248Q9HCU0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 KRT18P11-201ENST00000435214 1283 ntBASIC21.86■■□□□ 1.09
CD248Q9HCU0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD248Q9HCU0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD248Q9HCU0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CD248Q9HCU0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CD248Q9HCU0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.85■■□□□ 1.09
CD248Q9HCU0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.85■■□□□ 1.09
CD248Q9HCU0 NCF1B-203ENST00000435988 1254 ntBASIC21.85■■□□□ 1.09
CD248Q9HCU0 MFSD11-216ENST00000590393 1141 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms