Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 AC008550.1-201ENST00000511500 884 ntBASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RC3H2Q9HBD1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.53■■□□□ 1.2
RC3H2Q9HBD1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RC3H2Q9HBD1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.52■■□□□ 1.19
RC3H2Q9HBD1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RC3H2Q9HBD1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
RC3H2Q9HBD1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 AC245052.3-201ENST00000450182 901 ntBASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 UBE2SP1-201ENST00000450587 669 ntBASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
RC3H2Q9HBD1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 CDV3P1-201ENST00000471403 739 ntBASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 AC092053.2-201ENST00000640557 1818 ntBASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RC3H2Q9HBD1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 MCRIP2P1-201ENST00000394346 511 ntBASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 AL589743.5-201ENST00000616611 1050 ntBASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RC3H2Q9HBD1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 PNMA6B-201ENST00000538162 1200 ntBASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RC3H2Q9HBD1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms