Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SLC47A1P1-202ENST00000449666 945 ntBASIC19.86■□□□□ 0.77
NANOGQ9H9S0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.86■□□□□ 0.77
NANOGQ9H9S0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.85■□□□□ 0.77
NANOGQ9H9S0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NANOGQ9H9S0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 SYT6-210ENST00000641643 1587 ntBASIC19.84■□□□□ 0.77
NANOGQ9H9S0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 GUSBP5-201ENST00000418136 578 ntBASIC19.84■□□□□ 0.77
NANOGQ9H9S0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 AC136469.2-201ENST00000623944 1028 ntBASIC19.84■□□□□ 0.77
NANOGQ9H9S0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NANOGQ9H9S0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 AC121338.2-201ENST00000622535 1744 ntBASIC19.83■□□□□ 0.77
NANOGQ9H9S0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NANOGQ9H9S0 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.83■□□□□ 0.77
NANOGQ9H9S0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.83■□□□□ 0.76
NANOGQ9H9S0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.82■□□□□ 0.76
NANOGQ9H9S0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 AC027702.1-201ENST00000563810 1770 ntBASIC19.81■□□□□ 0.76
NANOGQ9H9S0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 DUX4L19-201ENST00000557448 1267 ntBASIC19.81■□□□□ 0.76
NANOGQ9H9S0 AC011298.3-201ENST00000615796 283 ntBASIC19.81■□□□□ 0.76
NANOGQ9H9S0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms