Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 AC125437.2-201ENST00000625180 2167 ntBASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 AC141586.5-201ENST00000624546 2050 ntBASIC12.3□□□□□ -0.44
CYSTM1Q9H1C7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 AL390961.4-201ENST00000623958 2535 ntBASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 AL596257.1-201ENST00000641463 2694 ntBASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 CICP6-201ENST00000457191 2729 ntBASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CYSTM1Q9H1C7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CYSTM1Q9H1C7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CYSTM1Q9H1C7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CYSTM1Q9H1C7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 AC084018.2-201ENST00000613093 2607 ntBASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.26□□□□□ -0.45
CYSTM1Q9H1C7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms