Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
LSG1Q9H089 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.08■■□□□ 1.61
LSG1Q9H089 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.08■■□□□ 1.61
LSG1Q9H089 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.08■■□□□ 1.61
LSG1Q9H089 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.08■■□□□ 1.61
LSG1Q9H089 KRT18P61-201ENST00000585825 1298 ntBASIC25.08■■□□□ 1.61
LSG1Q9H089 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.08■■□□□ 1.61
LSG1Q9H089 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LSG1Q9H089 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
LSG1Q9H089 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LSG1Q9H089 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LSG1Q9H089 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
LSG1Q9H089 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
LSG1Q9H089 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.07■■□□□ 1.6
LSG1Q9H089 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.07■■□□□ 1.6
LSG1Q9H089 KRT18P14-201ENST00000534205 1250 ntBASIC25.07■■□□□ 1.6
LSG1Q9H089 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.07■■□□□ 1.6
LSG1Q9H089 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
LSG1Q9H089 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
LSG1Q9H089 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 PLK5-205ENST00000642079 1969 ntBASIC25.07■■□□□ 1.6
LSG1Q9H089 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.07■■□□□ 1.6
LSG1Q9H089 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
LSG1Q9H089 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LSG1Q9H089 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.06■■□□□ 1.6
LSG1Q9H089 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.06■■□□□ 1.6
LSG1Q9H089 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
LSG1Q9H089 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.06■■□□□ 1.6
LSG1Q9H089 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LSG1Q9H089 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LSG1Q9H089 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.06■■□□□ 1.6
LSG1Q9H089 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
LSG1Q9H089 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LSG1Q9H089 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 AP004607.4-201ENST00000530158 1459 ntBASIC25.05■■□□□ 1.6
LSG1Q9H089 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.05■■□□□ 1.6
LSG1Q9H089 AC104187.1-201ENST00000607510 612 ntBASIC25.05■■□□□ 1.6
LSG1Q9H089 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LSG1Q9H089 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSG1Q9H089 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
LSG1Q9H089 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LSG1Q9H089 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
LSG1Q9H089 AC010141.2-201ENST00000452426 721 ntBASIC25.04■■□□□ 1.6
LSG1Q9H089 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.04■■□□□ 1.6
LSG1Q9H089 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LSG1Q9H089 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.04■■□□□ 1.6
LSG1Q9H089 AC004854.2-201ENST00000608450 1441 ntBASIC25.03■■□□□ 1.6
LSG1Q9H089 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LSG1Q9H089 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.03■■□□□ 1.6
LSG1Q9H089 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
LSG1Q9H089 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.03■■□□□ 1.6
LSG1Q9H089 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.03■■□□□ 1.6
LSG1Q9H089 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.03■■□□□ 1.6
LSG1Q9H089 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.03■■□□□ 1.6
LSG1Q9H089 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.03■■□□□ 1.6
LSG1Q9H089 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.03■■□□□ 1.6
LSG1Q9H089 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.03■■□□□ 1.6
LSG1Q9H089 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LSG1Q9H089 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.03■■□□□ 1.6
LSG1Q9H089 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
LSG1Q9H089 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.02■■□□□ 1.6
LSG1Q9H089 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.02■■□□□ 1.6
LSG1Q9H089 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.02■■□□□ 1.6
LSG1Q9H089 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
LSG1Q9H089 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.02■■□□□ 1.6
LSG1Q9H089 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSG1Q9H089 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSG1Q9H089 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.02■■□□□ 1.6
LSG1Q9H089 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSG1Q9H089 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSG1Q9H089 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.02■■□□□ 1.6
LSG1Q9H089 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSG1Q9H089 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LSG1Q9H089 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
LSG1Q9H089 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms