Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAF4Q9BUZ4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAF4Q9BUZ4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 BX005040.4-201ENST00000637145 1518 ntBASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAF4Q9BUZ4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAF4Q9BUZ4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAF4Q9BUZ4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.64■□□□□ 0.58
TRAF4Q9BUZ4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 KRT18P61-201ENST00000585825 1298 ntBASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 SMUG1P1-201ENST00000590640 811 ntBASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 AC244015.2-201ENST00000616358 1861 ntBASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF4Q9BUZ4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAF4Q9BUZ4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms