Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCM2Q9BSQ5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCM2Q9BSQ5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.64■□□□□ 0.9
CCM2Q9BSQ5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2Q9BSQ5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 AC006015.1-201ENST00000429970 570 ntBASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 AL137784.2-201ENST00000607332 1000 ntBASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCM2Q9BSQ5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 KRT16P2-201ENST00000414673 1423 ntBASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 UBE2DNL-204ENST00000602536 740 ntBASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCM2Q9BSQ5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCM2Q9BSQ5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 SLC7A5P1-201ENST00000568957 537 ntBASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 IKBKGP1-201ENST00000612193 1073 ntBASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCM2Q9BSQ5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
CCM2Q9BSQ5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCM2Q9BSQ5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms