Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.71■□□□□ 0.42
FOXC2Q99958 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 AC092368.3-202ENST00000574180 1591 ntBASIC17.7■□□□□ 0.42
FOXC2Q99958 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXC2Q99958 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
FOXC2Q99958 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
FOXC2Q99958 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXC2Q99958 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXC2Q99958 AC233702.5-201ENST00000584107 538 ntBASIC17.7■□□□□ 0.42
FOXC2Q99958 AC069544.1-201ENST00000609399 999 ntBASIC17.7■□□□□ 0.42
FOXC2Q99958 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXC2Q99958 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXC2Q99958 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXC2Q99958 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXC2Q99958 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXC2Q99958 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXC2Q99958 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXC2Q99958 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.69■□□□□ 0.42
FOXC2Q99958 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXC2Q99958 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXC2Q99958 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXC2Q99958 FAM21FP-204ENST00000608637 956 ntBASIC17.69■□□□□ 0.42
FOXC2Q99958 AL589743.5-201ENST00000616611 1050 ntBASIC17.69■□□□□ 0.42
FOXC2Q99958 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
FOXC2Q99958 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXC2Q99958 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXC2Q99958 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
FOXC2Q99958 AC138932.3-201ENST00000567634 1902 ntBASIC17.68■□□□□ 0.42
FOXC2Q99958 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
FOXC2Q99958 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 AL355472.2-201ENST00000422958 438 ntBASIC17.68■□□□□ 0.42
FOXC2Q99958 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXC2Q99958 LINC01960-201ENST00000563759 1884 ntBASIC17.68■□□□□ 0.42
FOXC2Q99958 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXC2Q99958 AP001412.1-201ENST00000608405 714 ntBASIC17.68■□□□□ 0.42
FOXC2Q99958 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 AC133561.5-201ENST00000635547 218 ntBASIC17.68■□□□□ 0.42
FOXC2Q99958 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
FOXC2Q99958 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXC2Q99958 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXC2Q99958 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXC2Q99958 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FOXC2Q99958 RPS2P55-201ENST00000397318 883 ntBASIC17.67■□□□□ 0.42
FOXC2Q99958 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FOXC2Q99958 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXC2Q99958 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.67■□□□□ 0.42
FOXC2Q99958 AC107956.1-201ENST00000494359 873 ntBASIC17.67■□□□□ 0.42
FOXC2Q99958 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXC2Q99958 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FOXC2Q99958 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXC2Q99958 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.66■□□□□ 0.42
FOXC2Q99958 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FOXC2Q99958 AC233263.1-201ENST00000578059 224 ntBASIC17.66■□□□□ 0.42
FOXC2Q99958 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms