Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMOQ99835 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SMOQ99835 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SMOQ99835 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.09■■□□□ 1.13
SMOQ99835 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.09■■□□□ 1.13
SMOQ99835 AC007322.1-201ENST00000426983 750 ntBASIC22.09■■□□□ 1.13
SMOQ99835 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.09■■□□□ 1.13
SMOQ99835 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SMOQ99835 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.09■■□□□ 1.13
SMOQ99835 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.09■■□□□ 1.13
SMOQ99835 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.09■■□□□ 1.13
SMOQ99835 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SMOQ99835 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMOQ99835 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.09■■□□□ 1.13
SMOQ99835 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMOQ99835 AC079834.2-201ENST00000609776 1949 ntBASIC22.08■■□□□ 1.13
SMOQ99835 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMOQ99835 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.08■■□□□ 1.13
SMOQ99835 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SMOQ99835 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
SMOQ99835 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SMOQ99835 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMOQ99835 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.08■■□□□ 1.13
SMOQ99835 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMOQ99835 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.08■■□□□ 1.13
SMOQ99835 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.08■■□□□ 1.13
SMOQ99835 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
SMOQ99835 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMOQ99835 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SMOQ99835 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.08■■□□□ 1.12
SMOQ99835 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMOQ99835 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.08■■□□□ 1.12
SMOQ99835 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
SMOQ99835 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.07■■□□□ 1.12
SMOQ99835 LINC00565-201ENST00000562710 2331 ntBASIC22.07■■□□□ 1.12
SMOQ99835 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.07■■□□□ 1.12
SMOQ99835 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.07■■□□□ 1.12
SMOQ99835 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.07■■□□□ 1.12
SMOQ99835 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.07■■□□□ 1.12
SMOQ99835 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.07■■□□□ 1.12
SMOQ99835 AL050303.2-201ENST00000619798 666 ntBASIC22.07■■□□□ 1.12
SMOQ99835 AC013268.1-206ENST00000638368 961 ntBASIC22.07■■□□□ 1.12
SMOQ99835 AC112229.1-201ENST00000639295 961 ntBASIC22.07■■□□□ 1.12
SMOQ99835 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SMOQ99835 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.07■■□□□ 1.12
SMOQ99835 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMOQ99835 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.07■■□□□ 1.12
SMOQ99835 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 MIR663A-201ENST00000385250 93 ntBASIC22.06■■□□□ 1.12
SMOQ99835 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.06■■□□□ 1.12
SMOQ99835 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.06■■□□□ 1.12
SMOQ99835 AC243732.1-201ENST00000612648 864 ntBASIC22.06■■□□□ 1.12
SMOQ99835 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.06■■□□□ 1.12
SMOQ99835 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SMOQ99835 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMOQ99835 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.06■■□□□ 1.12
SMOQ99835 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.06■■□□□ 1.12
SMOQ99835 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 AC007322.4-201ENST00000509611 723 ntBASIC22.05■■□□□ 1.12
SMOQ99835 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SMOQ99835 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SMOQ99835 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.05■■□□□ 1.12
SMOQ99835 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SMOQ99835 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMOQ99835 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.04■■□□□ 1.12
SMOQ99835 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.04■■□□□ 1.12
SMOQ99835 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms