Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS1Q99742 AC022517.1-201ENST00000592429 346 ntBASIC19.1■□□□□ 0.65
NPAS1Q99742 AP001160.3-201ENST00000601484 763 ntBASIC19.1■□□□□ 0.65
NPAS1Q99742 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS1Q99742 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NPAS1Q99742 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.1■□□□□ 0.65
NPAS1Q99742 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NPAS1Q99742 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPAS1Q99742 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.09■□□□□ 0.65
NPAS1Q99742 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.09■□□□□ 0.65
NPAS1Q99742 AC010141.2-201ENST00000452426 721 ntBASIC19.09■□□□□ 0.65
NPAS1Q99742 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.09■□□□□ 0.65
NPAS1Q99742 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.09■□□□□ 0.65
NPAS1Q99742 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPAS1Q99742 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS1Q99742 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.08■□□□□ 0.65
NPAS1Q99742 AF106564.1-201ENST00000607058 2553 ntBASIC19.08■□□□□ 0.65
NPAS1Q99742 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.08■□□□□ 0.65
NPAS1Q99742 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NPAS1Q99742 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPAS1Q99742 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NPAS1Q99742 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS1Q99742 SLC7A5P2-201ENST00000553010 536 ntBASIC19.08■□□□□ 0.64
NPAS1Q99742 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.08■□□□□ 0.64
NPAS1Q99742 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.08■□□□□ 0.64
NPAS1Q99742 AC092437.1-201ENST00000624794 1048 ntBASIC19.08■□□□□ 0.64
NPAS1Q99742 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS1Q99742 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS1Q99742 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS1Q99742 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.08■□□□□ 0.64
NPAS1Q99742 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.08■□□□□ 0.64
NPAS1Q99742 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPAS1Q99742 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NPAS1Q99742 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.07■□□□□ 0.64
NPAS1Q99742 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.07■□□□□ 0.64
NPAS1Q99742 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NPAS1Q99742 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.07■□□□□ 0.64
NPAS1Q99742 KRT19P1-201ENST00000405746 1186 ntBASIC19.07■□□□□ 0.64
NPAS1Q99742 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.07■□□□□ 0.64
NPAS1Q99742 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.07■□□□□ 0.64
NPAS1Q99742 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NPAS1Q99742 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NPAS1Q99742 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.07■□□□□ 0.64
NPAS1Q99742 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPAS1Q99742 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
NPAS1Q99742 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS1Q99742 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.06■□□□□ 0.64
NPAS1Q99742 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
NPAS1Q99742 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.06■□□□□ 0.64
NPAS1Q99742 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS1Q99742 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS1Q99742 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.06■□□□□ 0.64
NPAS1Q99742 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.06■□□□□ 0.64
NPAS1Q99742 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.06■□□□□ 0.64
NPAS1Q99742 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NPAS1Q99742 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
NPAS1Q99742 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.06■□□□□ 0.64
NPAS1Q99742 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.05■□□□□ 0.64
NPAS1Q99742 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NPAS1Q99742 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.05■□□□□ 0.64
NPAS1Q99742 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.05■□□□□ 0.64
NPAS1Q99742 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.05■□□□□ 0.64
NPAS1Q99742 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.05■□□□□ 0.64
NPAS1Q99742 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.05■□□□□ 0.64
NPAS1Q99742 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPAS1Q99742 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NPAS1Q99742 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS1Q99742 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NPAS1Q99742 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS1Q99742 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS1Q99742 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.04■□□□□ 0.64
NPAS1Q99742 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms