Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 MIR4767-201ENST00000582827 78 ntBASIC16.33■□□□□ 0.2
TRGV9Q99603 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.33■□□□□ 0.2
TRGV9Q99603 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.33■□□□□ 0.2
TRGV9Q99603 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRGV9Q99603 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRGV9Q99603 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TRGV9Q99603 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRGV9Q99603 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.32■□□□□ 0.2
TRGV9Q99603 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRGV9Q99603 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRGV9Q99603 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 IGHV3-19-201ENST00000521488 291 ntBASIC16.32■□□□□ 0.2
TRGV9Q99603 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRGV9Q99603 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.32■□□□□ 0.2
TRGV9Q99603 AC126544.1-201ENST00000580842 1059 ntBASIC16.32■□□□□ 0.2
TRGV9Q99603 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.32■□□□□ 0.2
TRGV9Q99603 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.32■□□□□ 0.2
TRGV9Q99603 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 PLK5-205ENST00000642079 1969 ntBASIC16.31■□□□□ 0.2
TRGV9Q99603 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 AC121338.2-201ENST00000622535 1744 ntBASIC16.31■□□□□ 0.2
TRGV9Q99603 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRGV9Q99603 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.31■□□□□ 0.2
TRGV9Q99603 AL136116.3-201ENST00000402907 1138 ntBASIC16.31■□□□□ 0.2
TRGV9Q99603 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.31■□□□□ 0.2
TRGV9Q99603 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRGV9Q99603 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRGV9Q99603 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV9Q99603 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 AC055733.4-201ENST00000638462 1354 ntBASIC16.3■□□□□ 0.2
TRGV9Q99603 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRGV9Q99603 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.3■□□□□ 0.2
TRGV9Q99603 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV9Q99603 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV9Q99603 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.3■□□□□ 0.2
TRGV9Q99603 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRGV9Q99603 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRGV9Q99603 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRGV9Q99603 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRGV9Q99603 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.29■□□□□ 0.2
TRGV9Q99603 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRGV9Q99603 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.29■□□□□ 0.2
TRGV9Q99603 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 AP005212.1-201ENST00000581547 1997 ntBASIC16.29■□□□□ 0.2
TRGV9Q99603 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV9Q99603 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRGV9Q99603 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV9Q99603 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV9Q99603 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.29■□□□□ 0.2
TRGV9Q99603 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 UNC93B3-201ENST00000308076 687 ntBASIC16.29■□□□□ 0.2
TRGV9Q99603 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRGV9Q99603 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRGV9Q99603 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.29■□□□□ 0.2
TRGV9Q99603 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRGV9Q99603 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms