Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 AL121832.2-201ENST00000610979 668 ntBASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK5RAP1Q96SZ6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 GPX1P1-201ENST00000388829 606 ntBASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 AC133552.2-202ENST00000575694 574 ntBASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 AL591742.1-201ENST00000604433 565 ntBASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 AC008694.1-202ENST00000636953 945 ntBASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 AC068338.2-201ENST00000563278 1430 ntBASIC21.79■■□□□ 1.08
CDK5RAP1Q96SZ6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 HLA-L-209ENST00000420110 1011 ntBASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 AC069236.1-201ENST00000604339 616 ntBASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP1Q96SZ6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP1Q96SZ6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.77■■□□□ 1.07
CDK5RAP1Q96SZ6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CDK5RAP1Q96SZ6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
CDK5RAP1Q96SZ6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 AL109923.1-201ENST00000618799 583 ntBASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 AL050303.2-201ENST00000619798 666 ntBASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 OR10C1-204ENST00000622521 1039 ntBASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP1Q96SZ6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 AF201337.1-201ENST00000520239 748 ntBASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP1Q96SZ6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP1Q96SZ6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP1Q96SZ6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms